Gene : Phvul.005G034666 P. vulgaris v2.1
Defline:  (1 of 20) 1.1.1.195 - Cinnamyl-alcohol dehydrogenase / CAD Genomic Order:  342
Name:  ? Phvul.005G034666 Secondary Identifier:  ? PAC:37153026
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-361 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G034666 0.5kb upstream 0.5kb upstream 3200 true Chr05: 3239426-3242625 Phaseolus vulgaris
Phvul.005G034666 0.5kb upstream 0.5kb upstream 500 false Chr05: 3242126-3242625 Phaseolus vulgaris
Phvul.005G034666 0.5kb downstream 0.5kb downstream 3200 true Chr05: 3238926-3242125 Phaseolus vulgaris
Phvul.005G034666 0.5kb downstream 0.5kb downstream 500 false Chr05: 3238926-3239425 Phaseolus vulgaris
Phvul.005G034666 1.0kb upstream 1.0kb upstream 3700 true Chr05: 3239426-3243125 Phaseolus vulgaris
Phvul.005G034666 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3242126-3243125 Phaseolus vulgaris
Phvul.005G034666 1.0kb downstream 1.0kb downstream 3700 true Chr05: 3238426-3242125 Phaseolus vulgaris
Phvul.005G034666 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3238426-3239425 Phaseolus vulgaris
Phvul.005G034666 2.0kb upstream 2.0kb upstream 4700 true Chr05: 3239426-3244125 Phaseolus vulgaris
Phvul.005G034666 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3242126-3244125 Phaseolus vulgaris
Phvul.005G034666 2.0kb downstream 2.0kb downstream 4700 true Chr05: 3237426-3242125 Phaseolus vulgaris
Phvul.005G034666 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3237426-3239425 Phaseolus vulgaris
Phvul.005G034666 5.0kb upstream 5.0kb upstream 7700 true Chr05: 3239426-3247125 Phaseolus vulgaris
Phvul.005G034666 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3242126-3247125 Phaseolus vulgaris
Phvul.005G034666 5.0kb downstream 5.0kb downstream 7700 true Chr05: 3234426-3242125 Phaseolus vulgaris
Phvul.005G034666 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3234426-3239425 Phaseolus vulgaris
Phvul.005G034666 10.0kb upstream 10.0kb upstream 12700 true Chr05: 3239426-3252125 Phaseolus vulgaris
Phvul.005G034666 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3242126-3252125 Phaseolus vulgaris
Phvul.005G034666 10.0kb downstream 10.0kb downstream 12700 true Chr05: 3229426-3242125 Phaseolus vulgaris
Phvul.005G034666 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3229426-3239425 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315756 5265 Fabidae View MSA
124072658 5270 Rosid View MSA
123749871 5271 Pentapetalae View MSA
122798457 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.8712 0.0 54.3791    
cufflinks 41.8693 0.0 108.569 High  
cufflinks 4.2077 0.0 12.6084   Low
cufflinks 57.6311 0.0 151.263 High  
cufflinks 14.6973 0.0 39.174    
cufflinks 60.9398 0.0 160.612 High  
cufflinks 68.9127 0.0 183.418 High High
cufflinks 38.7874 0.0 100.466 High  
cufflinks 29.5591 0.0 76.4214    
cufflinks 6.00514 0.0 17.3079   Low
cufflinks 46.6336 0.0 121.214 High  

0 Strain