Gene : Phvul.005G037900 P. vulgaris v2.1
Defline:  (1 of 94) PF02458 - Transferase family (Transferase) Genomic Order:  375
Name:  ? Phvul.005G037900 Secondary Identifier:  ? PAC:37154562
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G037900 0.5kb upstream 0.5kb upstream 2048 true Chr05: 3708508-3710555 Phaseolus vulgaris
Phvul.005G037900 0.5kb upstream 0.5kb upstream 500 false Chr05: 3708508-3709007 Phaseolus vulgaris
Phvul.005G037900 0.5kb downstream 0.5kb downstream 2048 true Chr05: 3709008-3711055 Phaseolus vulgaris
Phvul.005G037900 0.5kb downstream 0.5kb downstream 500 false Chr05: 3710556-3711055 Phaseolus vulgaris
Phvul.005G037900 1.0kb upstream 1.0kb upstream 2548 true Chr05: 3708008-3710555 Phaseolus vulgaris
Phvul.005G037900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3708008-3709007 Phaseolus vulgaris
Phvul.005G037900 1.0kb downstream 1.0kb downstream 2548 true Chr05: 3709008-3711555 Phaseolus vulgaris
Phvul.005G037900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3710556-3711555 Phaseolus vulgaris
Phvul.005G037900 2.0kb upstream 2.0kb upstream 3548 true Chr05: 3707008-3710555 Phaseolus vulgaris
Phvul.005G037900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3707008-3709007 Phaseolus vulgaris
Phvul.005G037900 2.0kb downstream 2.0kb downstream 3548 true Chr05: 3709008-3712555 Phaseolus vulgaris
Phvul.005G037900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3710556-3712555 Phaseolus vulgaris
Phvul.005G037900 5.0kb upstream 5.0kb upstream 6548 true Chr05: 3704008-3710555 Phaseolus vulgaris
Phvul.005G037900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3704008-3709007 Phaseolus vulgaris
Phvul.005G037900 5.0kb downstream 5.0kb downstream 6548 true Chr05: 3709008-3715555 Phaseolus vulgaris
Phvul.005G037900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3710556-3715555 Phaseolus vulgaris
Phvul.005G037900 10.0kb upstream 10.0kb upstream 11548 true Chr05: 3699008-3710555 Phaseolus vulgaris
Phvul.005G037900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3699008-3709007 Phaseolus vulgaris
Phvul.005G037900 10.0kb downstream 10.0kb downstream 11548 true Chr05: 3709008-3720555 Phaseolus vulgaris
Phvul.005G037900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3710556-3720555 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315674 5265 Fabidae View MSA
124068484 5270 Rosid View MSA
123747860 5271 Pentapetalae View MSA
122791254 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.31239 0.0 15.4771    
cufflinks 6.04479 0.0 17.3449    
cufflinks 2.4472 0.0 7.77268    
cufflinks 2.46398 0.0 7.82308    
cufflinks 5.37481 0.0 15.6448    
cufflinks 15.9495 0.0 42.1179   High
cufflinks 0.0488107 0.0 0.222234 Low Low
cufflinks 0.0367045 0.0 0.172297 Low Low
cufflinks 0.185417 0.0 0.748341 Low  
cufflinks 0.036412 0.0 0.172028 Low Low
cufflinks 6.97764 0.0 19.7655    

0 Strain