Gene : Phvul.007G179100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11514:SF53 - TRANSCRIPTION FACTOR BHLH3 Genomic Order:  1652
Name:  ? Phvul.007G179100 Secondary Identifier:  ? PAC:37166956
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G179100 0.5kb upstream 0.5kb upstream 2744 true Chr07: 29935371-29938114 Phaseolus vulgaris
Phvul.007G179100 0.5kb upstream 0.5kb upstream 500 false Chr07: 29935371-29935870 Phaseolus vulgaris
Phvul.007G179100 0.5kb downstream 0.5kb downstream 2744 true Chr07: 29935871-29938614 Phaseolus vulgaris
Phvul.007G179100 0.5kb downstream 0.5kb downstream 500 false Chr07: 29938115-29938614 Phaseolus vulgaris
Phvul.007G179100 1.0kb upstream 1.0kb upstream 3244 true Chr07: 29934871-29938114 Phaseolus vulgaris
Phvul.007G179100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 29934871-29935870 Phaseolus vulgaris
Phvul.007G179100 1.0kb downstream 1.0kb downstream 3244 true Chr07: 29935871-29939114 Phaseolus vulgaris
Phvul.007G179100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 29938115-29939114 Phaseolus vulgaris
Phvul.007G179100 2.0kb upstream 2.0kb upstream 4244 true Chr07: 29933871-29938114 Phaseolus vulgaris
Phvul.007G179100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 29933871-29935870 Phaseolus vulgaris
Phvul.007G179100 2.0kb downstream 2.0kb downstream 4244 true Chr07: 29935871-29940114 Phaseolus vulgaris
Phvul.007G179100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 29938115-29940114 Phaseolus vulgaris
Phvul.007G179100 5.0kb upstream 5.0kb upstream 7244 true Chr07: 29930871-29938114 Phaseolus vulgaris
Phvul.007G179100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 29930871-29935870 Phaseolus vulgaris
Phvul.007G179100 5.0kb downstream 5.0kb downstream 7244 true Chr07: 29935871-29943114 Phaseolus vulgaris
Phvul.007G179100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 29938115-29943114 Phaseolus vulgaris
Phvul.007G179100 10.0kb upstream 10.0kb upstream 12244 true Chr07: 29925871-29938114 Phaseolus vulgaris
Phvul.007G179100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 29925871-29935870 Phaseolus vulgaris
Phvul.007G179100 10.0kb downstream 10.0kb downstream 12244 true Chr07: 29935871-29948114 Phaseolus vulgaris
Phvul.007G179100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 29938115-29948114 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307426 5265 Fabidae View MSA
124062097 5270 Rosid View MSA
123736718 5271 Pentapetalae View MSA
122790494 5272 Eudicot View MSA
122049389 5273 Angiosperm View MSA
121351644 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.308 0.0 71.0153    
cufflinks 30.8902 0.0 80.6594    
cufflinks 30.6722 0.0 80.1179    
cufflinks 24.2556 0.0 62.7397    
cufflinks 26.0317 0.0 67.4903    
cufflinks 44.3373 0.0 118.449 High High
cufflinks 20.7565 0.0 53.6793   Low
cufflinks 19.6909 0.0 50.9073   Low
cufflinks 18.5695 0.0 48.0034   Low
cufflinks 29.4084 0.0 76.5862    
cufflinks 35.6954 0.0 93.7586 High High

0 Strain