Gene : Phvul.005G037200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12452 - 42-9-9 PROTEIN-RELATED Genomic Order:  369
Name:  ? Phvul.005G037200 Secondary Identifier:  ? PAC:37153930
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G037200 0.5kb upstream 0.5kb upstream 1792 true Chr05: 3634324-3636115 Phaseolus vulgaris
Phvul.005G037200 0.5kb upstream 0.5kb upstream 500 false Chr05: 3634324-3634823 Phaseolus vulgaris
Phvul.005G037200 0.5kb downstream 0.5kb downstream 1792 true Chr05: 3634824-3636615 Phaseolus vulgaris
Phvul.005G037200 0.5kb downstream 0.5kb downstream 500 false Chr05: 3636116-3636615 Phaseolus vulgaris
Phvul.005G037200 1.0kb upstream 1.0kb upstream 2292 true Chr05: 3633824-3636115 Phaseolus vulgaris
Phvul.005G037200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3633824-3634823 Phaseolus vulgaris
Phvul.005G037200 1.0kb downstream 1.0kb downstream 2292 true Chr05: 3634824-3637115 Phaseolus vulgaris
Phvul.005G037200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3636116-3637115 Phaseolus vulgaris
Phvul.005G037200 2.0kb upstream 2.0kb upstream 3292 true Chr05: 3632824-3636115 Phaseolus vulgaris
Phvul.005G037200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3632824-3634823 Phaseolus vulgaris
Phvul.005G037200 2.0kb downstream 2.0kb downstream 3292 true Chr05: 3634824-3638115 Phaseolus vulgaris
Phvul.005G037200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3636116-3638115 Phaseolus vulgaris
Phvul.005G037200 5.0kb upstream 5.0kb upstream 6292 true Chr05: 3629824-3636115 Phaseolus vulgaris
Phvul.005G037200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3629824-3634823 Phaseolus vulgaris
Phvul.005G037200 5.0kb downstream 5.0kb downstream 6292 true Chr05: 3634824-3641115 Phaseolus vulgaris
Phvul.005G037200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3636116-3641115 Phaseolus vulgaris
Phvul.005G037200 10.0kb upstream 10.0kb upstream 11292 true Chr05: 3624824-3636115 Phaseolus vulgaris
Phvul.005G037200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3624824-3634823 Phaseolus vulgaris
Phvul.005G037200 10.0kb downstream 10.0kb downstream 11292 true Chr05: 3634824-3646115 Phaseolus vulgaris
Phvul.005G037200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3636116-3646115 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305873 5265 Fabidae View MSA
124062301 5270 Rosid View MSA
123739980 5271 Pentapetalae View MSA
122791634 5272 Eudicot View MSA
122046977 5273 Angiosperm View MSA
121346988 5274 Embryophyte View MSA
123427976 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.4784 0.0 83.6539    
cufflinks 28.0252 0.0 75.071    
cufflinks 23.143 0.0 62.9007    
cufflinks 68.125 0.0 176.09 High High
cufflinks 32.7303 0.0 86.7912 High  
cufflinks 15.5973 0.0 43.9331   Low
cufflinks 14.1127 0.0 40.03   Low
cufflinks 27.1791 0.0 72.9318    
cufflinks 18.8045 0.0 51.9718    
cufflinks 25.0771 0.0 67.899    
cufflinks 30.5554 0.0 81.3734    

0 Strain