Gene : Phvul.007G180300 P. vulgaris v2.1
Defline:  (1 of 3) K07870 - Ras homolog gene family, member T1 (RHOT1, ARHT1) Genomic Order:  1664
Name:  ? Phvul.007G180300 Secondary Identifier:  ? PAC:37165225
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G180300 0.5kb upstream 0.5kb upstream 11314 true Chr07: 30065535-30076848 Phaseolus vulgaris
Phvul.007G180300 0.5kb upstream 0.5kb upstream 500 false Chr07: 30076349-30076848 Phaseolus vulgaris
Phvul.007G180300 0.5kb downstream 0.5kb downstream 11314 true Chr07: 30065035-30076348 Phaseolus vulgaris
Phvul.007G180300 0.5kb downstream 0.5kb downstream 500 false Chr07: 30065035-30065534 Phaseolus vulgaris
Phvul.007G180300 1.0kb upstream 1.0kb upstream 11814 true Chr07: 30065535-30077348 Phaseolus vulgaris
Phvul.007G180300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 30076349-30077348 Phaseolus vulgaris
Phvul.007G180300 1.0kb downstream 1.0kb downstream 11814 true Chr07: 30064535-30076348 Phaseolus vulgaris
Phvul.007G180300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 30064535-30065534 Phaseolus vulgaris
Phvul.007G180300 2.0kb upstream 2.0kb upstream 12814 true Chr07: 30065535-30078348 Phaseolus vulgaris
Phvul.007G180300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 30076349-30078348 Phaseolus vulgaris
Phvul.007G180300 2.0kb downstream 2.0kb downstream 12814 true Chr07: 30063535-30076348 Phaseolus vulgaris
Phvul.007G180300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 30063535-30065534 Phaseolus vulgaris
Phvul.007G180300 5.0kb upstream 5.0kb upstream 15814 true Chr07: 30065535-30081348 Phaseolus vulgaris
Phvul.007G180300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 30076349-30081348 Phaseolus vulgaris
Phvul.007G180300 5.0kb downstream 5.0kb downstream 15814 true Chr07: 30060535-30076348 Phaseolus vulgaris
Phvul.007G180300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 30060535-30065534 Phaseolus vulgaris
Phvul.007G180300 10.0kb upstream 10.0kb upstream 20814 true Chr07: 30065535-30086348 Phaseolus vulgaris
Phvul.007G180300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 30076349-30086348 Phaseolus vulgaris
Phvul.007G180300 10.0kb downstream 10.0kb downstream 20814 true Chr07: 30055535-30076348 Phaseolus vulgaris
Phvul.007G180300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 30055535-30065534 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308432 5265 Fabidae View MSA
124072743 5270 Rosid View MSA
123746250 5271 Pentapetalae View MSA
122793310 5272 Eudicot View MSA
122043927 5273 Angiosperm View MSA
121347375 5274 Embryophyte View MSA
123428304 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.9357 0.0 67.5161   Low
cufflinks 30.8405 0.0 80.9392    
cufflinks 28.2255 0.0 73.816    
cufflinks 35.2495 0.0 92.8464 High  
cufflinks 32.4118 0.0 85.0966    
cufflinks 28.5312 0.0 74.602    
cufflinks 29.9984 0.0 78.6432 High  
cufflinks 29.8205 0.0 78.2895 High  
cufflinks 35.3159 0.0 93.3519 High  
cufflinks 40.1792 0.0 107.346 High High
cufflinks 31.8942 0.0 83.7148    

0 Strain