Gene : Phvul.007G182200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10110//PTHR10110:SF107 - SODIUM/HYDROGEN EXCHANGER // SUBFAMILY NOT NAMED Genomic Order:  1683
Name:  ? Phvul.007G182200 Secondary Identifier:  ? PAC:37164507
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G182200 0.5kb upstream 0.5kb upstream 6091 true Chr07: 30229683-30235773 Phaseolus vulgaris
Phvul.007G182200 0.5kb upstream 0.5kb upstream 500 false Chr07: 30235274-30235773 Phaseolus vulgaris
Phvul.007G182200 0.5kb downstream 0.5kb downstream 6091 true Chr07: 30229183-30235273 Phaseolus vulgaris
Phvul.007G182200 0.5kb downstream 0.5kb downstream 500 false Chr07: 30229183-30229682 Phaseolus vulgaris
Phvul.007G182200 1.0kb upstream 1.0kb upstream 6591 true Chr07: 30229683-30236273 Phaseolus vulgaris
Phvul.007G182200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 30235274-30236273 Phaseolus vulgaris
Phvul.007G182200 1.0kb downstream 1.0kb downstream 6591 true Chr07: 30228683-30235273 Phaseolus vulgaris
Phvul.007G182200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 30228683-30229682 Phaseolus vulgaris
Phvul.007G182200 2.0kb upstream 2.0kb upstream 7591 true Chr07: 30229683-30237273 Phaseolus vulgaris
Phvul.007G182200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 30235274-30237273 Phaseolus vulgaris
Phvul.007G182200 2.0kb downstream 2.0kb downstream 7591 true Chr07: 30227683-30235273 Phaseolus vulgaris
Phvul.007G182200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 30227683-30229682 Phaseolus vulgaris
Phvul.007G182200 5.0kb upstream 5.0kb upstream 10591 true Chr07: 30229683-30240273 Phaseolus vulgaris
Phvul.007G182200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 30235274-30240273 Phaseolus vulgaris
Phvul.007G182200 5.0kb downstream 5.0kb downstream 10591 true Chr07: 30224683-30235273 Phaseolus vulgaris
Phvul.007G182200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 30224683-30229682 Phaseolus vulgaris
Phvul.007G182200 10.0kb upstream 10.0kb upstream 15591 true Chr07: 30229683-30245273 Phaseolus vulgaris
Phvul.007G182200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 30235274-30245273 Phaseolus vulgaris
Phvul.007G182200 10.0kb downstream 10.0kb downstream 15591 true Chr07: 30219683-30235273 Phaseolus vulgaris
Phvul.007G182200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 30219683-30229682 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307136 5265 Fabidae View MSA
124071426 5270 Rosid View MSA
123744336 5271 Pentapetalae View MSA
122771028 5272 Eudicot View MSA
122052232 5273 Angiosperm View MSA
121313069 5274 Embryophyte View MSA
123428503 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.45014 0.0 1.72777    
cufflinks 0.501533 0.0 1.90944    
cufflinks 3.55589 0.0 11.0389   High
cufflinks 0.32364 0.0 1.27923 Low  
cufflinks 0.634071 0.0 2.37704    
cufflinks 2.54547 0.0 8.24855   High
cufflinks 0.0988909 0.0 0.432608 Low Low
cufflinks 0.114518 0.0 0.4909 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.43448 0.0 10.7639   High
cufflinks 0.53595 0.0 2.03945 Low  

0 Strain