Gene : Phvul.005G041200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24031:SF303 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL Genomic Order:  410
Name:  ? Phvul.005G041200 Secondary Identifier:  ? PAC:37152859
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G041200 0.5kb upstream 0.5kb upstream 2487 true Chr05: 4183945-4186431 Phaseolus vulgaris
Phvul.005G041200 0.5kb upstream 0.5kb upstream 500 false Chr05: 4185932-4186431 Phaseolus vulgaris
Phvul.005G041200 0.5kb downstream 0.5kb downstream 2487 true Chr05: 4183445-4185931 Phaseolus vulgaris
Phvul.005G041200 0.5kb downstream 0.5kb downstream 500 false Chr05: 4183445-4183944 Phaseolus vulgaris
Phvul.005G041200 1.0kb upstream 1.0kb upstream 2987 true Chr05: 4183945-4186931 Phaseolus vulgaris
Phvul.005G041200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4185932-4186931 Phaseolus vulgaris
Phvul.005G041200 1.0kb downstream 1.0kb downstream 2987 true Chr05: 4182945-4185931 Phaseolus vulgaris
Phvul.005G041200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4182945-4183944 Phaseolus vulgaris
Phvul.005G041200 2.0kb upstream 2.0kb upstream 3987 true Chr05: 4183945-4187931 Phaseolus vulgaris
Phvul.005G041200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4185932-4187931 Phaseolus vulgaris
Phvul.005G041200 2.0kb downstream 2.0kb downstream 3987 true Chr05: 4181945-4185931 Phaseolus vulgaris
Phvul.005G041200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4181945-4183944 Phaseolus vulgaris
Phvul.005G041200 5.0kb upstream 5.0kb upstream 6987 true Chr05: 4183945-4190931 Phaseolus vulgaris
Phvul.005G041200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4185932-4190931 Phaseolus vulgaris
Phvul.005G041200 5.0kb downstream 5.0kb downstream 6987 true Chr05: 4178945-4185931 Phaseolus vulgaris
Phvul.005G041200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4178945-4183944 Phaseolus vulgaris
Phvul.005G041200 10.0kb upstream 10.0kb upstream 11987 true Chr05: 4183945-4195931 Phaseolus vulgaris
Phvul.005G041200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4185932-4195931 Phaseolus vulgaris
Phvul.005G041200 10.0kb downstream 10.0kb downstream 11987 true Chr05: 4173945-4185931 Phaseolus vulgaris
Phvul.005G041200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4173945-4183944 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299913 5265 Fabidae View MSA
124066635 5270 Rosid View MSA
123739658 5271 Pentapetalae View MSA
122793354 5272 Eudicot View MSA
122045759 5273 Angiosperm View MSA
121346907 5274 Embryophyte View MSA
123426302 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.929446 0.0 3.12165   Low
cufflinks 2.37828 0.0 7.18    
cufflinks 8.14869 0.0 21.7884   High
cufflinks 0.847644 0.0 2.89951   Low
cufflinks 2.7939 0.0 8.30522    
cufflinks 8.89195 0.0 23.6469   High
cufflinks 1.6354 0.0 5.14062    
cufflinks 1.42478 0.0 4.54675    
cufflinks 1.87668 0.0 5.81657    
cufflinks 1.36846 0.0 4.40674    
cufflinks 2.13334 0.0 6.53262    

0 Strain