Gene : Phvul.007G183100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13268:SF2 - AUTOPHAGY-RELATED PROTEIN 18G Genomic Order:  1692
Name:  ? Phvul.007G183100 Secondary Identifier:  ? PAC:37164946
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G183100 0.5kb upstream 0.5kb upstream 7827 true Chr07: 30275541-30283367 Phaseolus vulgaris
Phvul.007G183100 0.5kb upstream 0.5kb upstream 500 false Chr07: 30275541-30276040 Phaseolus vulgaris
Phvul.007G183100 0.5kb downstream 0.5kb downstream 7827 true Chr07: 30276041-30283867 Phaseolus vulgaris
Phvul.007G183100 0.5kb downstream 0.5kb downstream 500 false Chr07: 30283368-30283867 Phaseolus vulgaris
Phvul.007G183100 1.0kb upstream 1.0kb upstream 8327 true Chr07: 30275041-30283367 Phaseolus vulgaris
Phvul.007G183100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 30275041-30276040 Phaseolus vulgaris
Phvul.007G183100 1.0kb downstream 1.0kb downstream 8327 true Chr07: 30276041-30284367 Phaseolus vulgaris
Phvul.007G183100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 30283368-30284367 Phaseolus vulgaris
Phvul.007G183100 2.0kb upstream 2.0kb upstream 9327 true Chr07: 30274041-30283367 Phaseolus vulgaris
Phvul.007G183100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 30274041-30276040 Phaseolus vulgaris
Phvul.007G183100 2.0kb downstream 2.0kb downstream 9327 true Chr07: 30276041-30285367 Phaseolus vulgaris
Phvul.007G183100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 30283368-30285367 Phaseolus vulgaris
Phvul.007G183100 5.0kb upstream 5.0kb upstream 12327 true Chr07: 30271041-30283367 Phaseolus vulgaris
Phvul.007G183100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 30271041-30276040 Phaseolus vulgaris
Phvul.007G183100 5.0kb downstream 5.0kb downstream 12327 true Chr07: 30276041-30288367 Phaseolus vulgaris
Phvul.007G183100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 30283368-30288367 Phaseolus vulgaris
Phvul.007G183100 10.0kb upstream 10.0kb upstream 17327 true Chr07: 30266041-30283367 Phaseolus vulgaris
Phvul.007G183100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 30266041-30276040 Phaseolus vulgaris
Phvul.007G183100 10.0kb downstream 10.0kb downstream 17327 true Chr07: 30276041-30293367 Phaseolus vulgaris
Phvul.007G183100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 30283368-30293367 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303531 5265 Fabidae View MSA
124063703 5270 Rosid View MSA
123744735 5271 Pentapetalae View MSA
122790134 5272 Eudicot View MSA
122047922 5273 Angiosperm View MSA
121350059 5274 Embryophyte View MSA
123424091 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.0453 0.0 36.3046    
cufflinks 10.4806 0.0 27.1892    
cufflinks 16.2289 0.0 42.0086    
cufflinks 5.44449 0.0 14.7233   Low
cufflinks 11.0276 0.0 28.5954    
cufflinks 13.9796 0.0 36.1347    
cufflinks 17.6293 0.0 45.6874    
cufflinks 13.1889 0.0 34.0909    
cufflinks 20.0738 0.0 52.1606   High
cufflinks 11.924 0.0 30.8546    
cufflinks 8.57225 0.0 22.4286    

0 Strain