Gene : Phvul.007G183400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23024:SF227 - GIBBERELLIN RECEPTOR GID1A-RELATED Genomic Order:  1695
Name:  ? Phvul.007G183400 Secondary Identifier:  ? PAC:37167638
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6303 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G183400 0.5kb upstream 0.5kb upstream 3112 true Chr07: 30309268-30312379 Phaseolus vulgaris
Phvul.007G183400 0.5kb upstream 0.5kb upstream 500 false Chr07: 30311880-30312379 Phaseolus vulgaris
Phvul.007G183400 0.5kb downstream 0.5kb downstream 3112 true Chr07: 30308768-30311879 Phaseolus vulgaris
Phvul.007G183400 0.5kb downstream 0.5kb downstream 500 false Chr07: 30308768-30309267 Phaseolus vulgaris
Phvul.007G183400 1.0kb upstream 1.0kb upstream 3612 true Chr07: 30309268-30312879 Phaseolus vulgaris
Phvul.007G183400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 30311880-30312879 Phaseolus vulgaris
Phvul.007G183400 1.0kb downstream 1.0kb downstream 3612 true Chr07: 30308268-30311879 Phaseolus vulgaris
Phvul.007G183400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 30308268-30309267 Phaseolus vulgaris
Phvul.007G183400 2.0kb upstream 2.0kb upstream 4612 true Chr07: 30309268-30313879 Phaseolus vulgaris
Phvul.007G183400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 30311880-30313879 Phaseolus vulgaris
Phvul.007G183400 2.0kb downstream 2.0kb downstream 4612 true Chr07: 30307268-30311879 Phaseolus vulgaris
Phvul.007G183400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 30307268-30309267 Phaseolus vulgaris
Phvul.007G183400 5.0kb upstream 5.0kb upstream 7612 true Chr07: 30309268-30316879 Phaseolus vulgaris
Phvul.007G183400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 30311880-30316879 Phaseolus vulgaris
Phvul.007G183400 5.0kb downstream 5.0kb downstream 7612 true Chr07: 30304268-30311879 Phaseolus vulgaris
Phvul.007G183400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 30304268-30309267 Phaseolus vulgaris
Phvul.007G183400 10.0kb upstream 10.0kb upstream 12612 true Chr07: 30309268-30321879 Phaseolus vulgaris
Phvul.007G183400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 30311880-30321879 Phaseolus vulgaris
Phvul.007G183400 10.0kb downstream 10.0kb downstream 12612 true Chr07: 30299268-30311879 Phaseolus vulgaris
Phvul.007G183400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 30299268-30309267 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306678 5265 Fabidae View MSA
124068362 5270 Rosid View MSA
123741426 5271 Pentapetalae View MSA
122795616 5272 Eudicot View MSA
122044098 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350684 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.4325 0.0 45.1174    
cufflinks 8.40346 0.0 22.5566   Low
cufflinks 18.5302 0.0 47.9356    
cufflinks 8.50639 0.0 22.9565   Low
cufflinks 26.6943 0.0 69.1356   High
cufflinks 14.3085 0.0 37.2169    
cufflinks 16.8617 0.0 43.6721    
cufflinks 10.9343 0.0 28.78    
cufflinks 17.6341 0.0 45.6673    
cufflinks 12.6252 0.0 33.0099    
cufflinks 25.4471 0.0 65.8682   High

0 Strain