Gene : Phvul.007G181900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11969:SF26 - TRANSCRIPTION FACTOR BHLH99 Genomic Order:  1680
Name:  ? Phvul.007G181900 Secondary Identifier:  ? PAC:37167316
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G181900 0.5kb upstream 0.5kb upstream 2377 true Chr07: 30214185-30216561 Phaseolus vulgaris
Phvul.007G181900 0.5kb upstream 0.5kb upstream 500 false Chr07: 30214185-30214684 Phaseolus vulgaris
Phvul.007G181900 0.5kb downstream 0.5kb downstream 2377 true Chr07: 30214685-30217061 Phaseolus vulgaris
Phvul.007G181900 0.5kb downstream 0.5kb downstream 500 false Chr07: 30216562-30217061 Phaseolus vulgaris
Phvul.007G181900 1.0kb upstream 1.0kb upstream 2877 true Chr07: 30213685-30216561 Phaseolus vulgaris
Phvul.007G181900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 30213685-30214684 Phaseolus vulgaris
Phvul.007G181900 1.0kb downstream 1.0kb downstream 2877 true Chr07: 30214685-30217561 Phaseolus vulgaris
Phvul.007G181900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 30216562-30217561 Phaseolus vulgaris
Phvul.007G181900 2.0kb upstream 2.0kb upstream 3877 true Chr07: 30212685-30216561 Phaseolus vulgaris
Phvul.007G181900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 30212685-30214684 Phaseolus vulgaris
Phvul.007G181900 2.0kb downstream 2.0kb downstream 3877 true Chr07: 30214685-30218561 Phaseolus vulgaris
Phvul.007G181900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 30216562-30218561 Phaseolus vulgaris
Phvul.007G181900 5.0kb upstream 5.0kb upstream 6877 true Chr07: 30209685-30216561 Phaseolus vulgaris
Phvul.007G181900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 30209685-30214684 Phaseolus vulgaris
Phvul.007G181900 5.0kb downstream 5.0kb downstream 6877 true Chr07: 30214685-30221561 Phaseolus vulgaris
Phvul.007G181900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 30216562-30221561 Phaseolus vulgaris
Phvul.007G181900 10.0kb upstream 10.0kb upstream 11877 true Chr07: 30204685-30216561 Phaseolus vulgaris
Phvul.007G181900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 30204685-30214684 Phaseolus vulgaris
Phvul.007G181900 10.0kb downstream 10.0kb downstream 11877 true Chr07: 30214685-30226561 Phaseolus vulgaris
Phvul.007G181900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 30216562-30226561 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311835 5265 Fabidae View MSA
124070189 5270 Rosid View MSA
123749285 5271 Pentapetalae View MSA
122794835 5272 Eudicot View MSA
122051154 5273 Angiosperm View MSA
121350598 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.02752 0.0 19.8893    
cufflinks 21.5018 0.0 55.9092   High
cufflinks 0.265933 0.0 1.04291 Low Low
cufflinks 5.04533 0.0 14.7954    
cufflinks 3.27684 0.0 10.129    
cufflinks 1.59281 0.0 5.29512    
cufflinks 11.5216 0.0 31.034    
cufflinks 20.2373 0.0 52.6404   High
cufflinks 2.69104 0.0 8.41552    
cufflinks 6.20477 0.0 17.7974    
cufflinks 15.2841 0.0 40.5391    

0 Strain