Gene : Phvul.007G181400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10252//PTHR10252:SF49 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1675
Name:  ? Phvul.007G181400 Secondary Identifier:  ? PAC:37167087
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G181400 0.5kb upstream 0.5kb upstream 2349 true Chr07: 30131508-30133856 Phaseolus vulgaris
Phvul.007G181400 0.5kb upstream 0.5kb upstream 500 false Chr07: 30133357-30133856 Phaseolus vulgaris
Phvul.007G181400 0.5kb downstream 0.5kb downstream 2349 true Chr07: 30131008-30133356 Phaseolus vulgaris
Phvul.007G181400 0.5kb downstream 0.5kb downstream 500 false Chr07: 30131008-30131507 Phaseolus vulgaris
Phvul.007G181400 1.0kb upstream 1.0kb upstream 2849 true Chr07: 30131508-30134356 Phaseolus vulgaris
Phvul.007G181400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 30133357-30134356 Phaseolus vulgaris
Phvul.007G181400 1.0kb downstream 1.0kb downstream 2849 true Chr07: 30130508-30133356 Phaseolus vulgaris
Phvul.007G181400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 30130508-30131507 Phaseolus vulgaris
Phvul.007G181400 2.0kb upstream 2.0kb upstream 3849 true Chr07: 30131508-30135356 Phaseolus vulgaris
Phvul.007G181400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 30133357-30135356 Phaseolus vulgaris
Phvul.007G181400 2.0kb downstream 2.0kb downstream 3849 true Chr07: 30129508-30133356 Phaseolus vulgaris
Phvul.007G181400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 30129508-30131507 Phaseolus vulgaris
Phvul.007G181400 5.0kb upstream 5.0kb upstream 6849 true Chr07: 30131508-30138356 Phaseolus vulgaris
Phvul.007G181400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 30133357-30138356 Phaseolus vulgaris
Phvul.007G181400 5.0kb downstream 5.0kb downstream 6849 true Chr07: 30126508-30133356 Phaseolus vulgaris
Phvul.007G181400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 30126508-30131507 Phaseolus vulgaris
Phvul.007G181400 10.0kb upstream 10.0kb upstream 11849 true Chr07: 30131508-30143356 Phaseolus vulgaris
Phvul.007G181400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 30133357-30143356 Phaseolus vulgaris
Phvul.007G181400 10.0kb downstream 10.0kb downstream 11849 true Chr07: 30121508-30133356 Phaseolus vulgaris
Phvul.007G181400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 30121508-30131507 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255112 5265 Fabidae View MSA
124071144 5270 Rosid View MSA
123743416 5271 Pentapetalae View MSA
122794744 5272 Eudicot View MSA
122049278 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121351220 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0324497 0.0 0.16082 Low Low
cufflinks 0.1168 0.0 0.505556 Low  
cufflinks 0.106561 0.0 0.464445 Low  
cufflinks 0.29037 0.0 1.16415 Low  
cufflinks 0.220522 0.0 0.907567 Low  
cufflinks 0.0400183 0.0 0.192949 Low Low
cufflinks 0.170383 0.0 0.711267 Low  
cufflinks 0.223177 0.0 0.90953 Low  
cufflinks 0.180911 0.0 0.75039 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.689804 0.0 2.59234   High

0 Strain