Gene : Phvul.005G024200 P. vulgaris v2.1
Defline:  (1 of 1) K03164 - DNA topoisomerase II [EC:5.99.1.3] (TOP2) Genomic Order:  239
Name:  ? Phvul.005G024200 Secondary Identifier:  ? PAC:37153821
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G024200 0.5kb upstream 0.5kb upstream 7510 true Chr05: 2215092-2222601 Phaseolus vulgaris
Phvul.005G024200 0.5kb upstream 0.5kb upstream 500 false Chr05: 2215092-2215591 Phaseolus vulgaris
Phvul.005G024200 0.5kb downstream 0.5kb downstream 7510 true Chr05: 2215592-2223101 Phaseolus vulgaris
Phvul.005G024200 0.5kb downstream 0.5kb downstream 500 false Chr05: 2222602-2223101 Phaseolus vulgaris
Phvul.005G024200 1.0kb upstream 1.0kb upstream 8010 true Chr05: 2214592-2222601 Phaseolus vulgaris
Phvul.005G024200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2214592-2215591 Phaseolus vulgaris
Phvul.005G024200 1.0kb downstream 1.0kb downstream 8010 true Chr05: 2215592-2223601 Phaseolus vulgaris
Phvul.005G024200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2222602-2223601 Phaseolus vulgaris
Phvul.005G024200 2.0kb upstream 2.0kb upstream 9010 true Chr05: 2213592-2222601 Phaseolus vulgaris
Phvul.005G024200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2213592-2215591 Phaseolus vulgaris
Phvul.005G024200 2.0kb downstream 2.0kb downstream 9010 true Chr05: 2215592-2224601 Phaseolus vulgaris
Phvul.005G024200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2222602-2224601 Phaseolus vulgaris
Phvul.005G024200 5.0kb upstream 5.0kb upstream 12010 true Chr05: 2210592-2222601 Phaseolus vulgaris
Phvul.005G024200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2210592-2215591 Phaseolus vulgaris
Phvul.005G024200 5.0kb downstream 5.0kb downstream 12010 true Chr05: 2215592-2227601 Phaseolus vulgaris
Phvul.005G024200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2222602-2227601 Phaseolus vulgaris
Phvul.005G024200 10.0kb upstream 10.0kb upstream 17010 true Chr05: 2205592-2222601 Phaseolus vulgaris
Phvul.005G024200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2205592-2215591 Phaseolus vulgaris
Phvul.005G024200 10.0kb downstream 10.0kb downstream 17010 true Chr05: 2215592-2232601 Phaseolus vulgaris
Phvul.005G024200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2222602-2232601 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299523 5265 Fabidae View MSA
124064018 5270 Rosid View MSA
123736481 5271 Pentapetalae View MSA
122791740 5272 Eudicot View MSA
122046291 5273 Angiosperm View MSA
121345151 5274 Embryophyte View MSA
123423865 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.80964 0.0 5.09107    
cufflinks 15.4304 0.0 40.7828    
cufflinks 3.44177 0.0 9.16729    
cufflinks 1.09317 0.0 3.25934   Low
cufflinks 9.01256 0.0 23.3006    
cufflinks 22.7759 0.0 62.2036   High
cufflinks 13.7832 0.0 36.2542    
cufflinks 8.47938 0.0 21.9361    
cufflinks 15.8474 0.0 42.0629    
cufflinks 0.358426 0.0 1.21043   Low
cufflinks 7.0711 0.0 18.2903    

0 Strain