Gene : Phvul.007G168500 P. vulgaris v2.1
Defline:  (1 of 2) KOG1893 - Uncharacterized conserved protein Genomic Order:  1547
Name:  ? Phvul.007G168500 Secondary Identifier:  ? PAC:37166429
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G168500 0.5kb upstream 0.5kb upstream 35707 true Chr07: 28455303-28491009 Phaseolus vulgaris
Phvul.007G168500 0.5kb upstream 0.5kb upstream 500 false Chr07: 28490510-28491009 Phaseolus vulgaris
Phvul.007G168500 0.5kb downstream 0.5kb downstream 35707 true Chr07: 28454803-28490509 Phaseolus vulgaris
Phvul.007G168500 0.5kb downstream 0.5kb downstream 500 false Chr07: 28454803-28455302 Phaseolus vulgaris
Phvul.007G168500 1.0kb upstream 1.0kb upstream 36207 true Chr07: 28455303-28491509 Phaseolus vulgaris
Phvul.007G168500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 28490510-28491509 Phaseolus vulgaris
Phvul.007G168500 1.0kb downstream 1.0kb downstream 36207 true Chr07: 28454303-28490509 Phaseolus vulgaris
Phvul.007G168500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 28454303-28455302 Phaseolus vulgaris
Phvul.007G168500 2.0kb upstream 2.0kb upstream 37207 true Chr07: 28455303-28492509 Phaseolus vulgaris
Phvul.007G168500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 28490510-28492509 Phaseolus vulgaris
Phvul.007G168500 2.0kb downstream 2.0kb downstream 37207 true Chr07: 28453303-28490509 Phaseolus vulgaris
Phvul.007G168500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 28453303-28455302 Phaseolus vulgaris
Phvul.007G168500 5.0kb upstream 5.0kb upstream 40207 true Chr07: 28455303-28495509 Phaseolus vulgaris
Phvul.007G168500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 28490510-28495509 Phaseolus vulgaris
Phvul.007G168500 5.0kb downstream 5.0kb downstream 40207 true Chr07: 28450303-28490509 Phaseolus vulgaris
Phvul.007G168500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 28450303-28455302 Phaseolus vulgaris
Phvul.007G168500 10.0kb upstream 10.0kb upstream 45207 true Chr07: 28455303-28500509 Phaseolus vulgaris
Phvul.007G168500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 28490510-28500509 Phaseolus vulgaris
Phvul.007G168500 10.0kb downstream 10.0kb downstream 45207 true Chr07: 28445303-28490509 Phaseolus vulgaris
Phvul.007G168500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 28445303-28455302 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041327 5273 Angiosperm View MSA
122306795 5265 Fabidae View MSA
124072084 5270 Rosid View MSA
123743818 5271 Pentapetalae View MSA
122790610 5272 Eudicot View MSA
121350793 5274 Embryophyte View MSA
123427500 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.882753 0.0 2.61874   Low
cufflinks 2.14484 0.0 5.84083    
cufflinks 4.53117 0.0 11.7561    
cufflinks 0.992027 0.0 2.93842   Low
cufflinks 3.01923 0.0 8.04112    
cufflinks 3.49769 0.0 9.18708    
cufflinks 4.05059 0.0 10.5817    
cufflinks 3.34249 0.0 8.78527    
cufflinks 3.94941 0.0 10.3494    
cufflinks 7.05206 0.0 18.2374   High
cufflinks 1.71963 0.0 4.80341    

0 Strain