Gene : Phvul.007G167100 P. vulgaris v2.1
Defline:  (1 of 6) PF00620//PF00786 - RhoGAP domain (RhoGAP) // P21-Rho-binding domain (PBD) Genomic Order:  1533
Name:  ? Phvul.007G167100 Secondary Identifier:  ? PAC:37165801
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G167100 0.5kb upstream 0.5kb upstream 3931 true Chr07: 28253829-28257759 Phaseolus vulgaris
Phvul.007G167100 0.5kb upstream 0.5kb upstream 500 false Chr07: 28257260-28257759 Phaseolus vulgaris
Phvul.007G167100 0.5kb downstream 0.5kb downstream 3931 true Chr07: 28253329-28257259 Phaseolus vulgaris
Phvul.007G167100 0.5kb downstream 0.5kb downstream 500 false Chr07: 28253329-28253828 Phaseolus vulgaris
Phvul.007G167100 1.0kb upstream 1.0kb upstream 4431 true Chr07: 28253829-28258259 Phaseolus vulgaris
Phvul.007G167100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 28257260-28258259 Phaseolus vulgaris
Phvul.007G167100 1.0kb downstream 1.0kb downstream 4431 true Chr07: 28252829-28257259 Phaseolus vulgaris
Phvul.007G167100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 28252829-28253828 Phaseolus vulgaris
Phvul.007G167100 2.0kb upstream 2.0kb upstream 5431 true Chr07: 28253829-28259259 Phaseolus vulgaris
Phvul.007G167100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 28257260-28259259 Phaseolus vulgaris
Phvul.007G167100 2.0kb downstream 2.0kb downstream 5431 true Chr07: 28251829-28257259 Phaseolus vulgaris
Phvul.007G167100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 28251829-28253828 Phaseolus vulgaris
Phvul.007G167100 5.0kb upstream 5.0kb upstream 8431 true Chr07: 28253829-28262259 Phaseolus vulgaris
Phvul.007G167100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 28257260-28262259 Phaseolus vulgaris
Phvul.007G167100 5.0kb downstream 5.0kb downstream 8431 true Chr07: 28248829-28257259 Phaseolus vulgaris
Phvul.007G167100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 28248829-28253828 Phaseolus vulgaris
Phvul.007G167100 10.0kb upstream 10.0kb upstream 13431 true Chr07: 28253829-28267259 Phaseolus vulgaris
Phvul.007G167100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 28257260-28267259 Phaseolus vulgaris
Phvul.007G167100 10.0kb downstream 10.0kb downstream 13431 true Chr07: 28243829-28257259 Phaseolus vulgaris
Phvul.007G167100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 28243829-28253828 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314458 5265 Fabidae View MSA
124063146 5270 Rosid View MSA
123747483 5271 Pentapetalae View MSA
122789353 5272 Eudicot View MSA
122046059 5273 Angiosperm View MSA
121350100 5274 Embryophyte View MSA
123381579 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.66223 0.0 24.5144    
cufflinks 11.8849 0.0 39.6451   High
cufflinks 3.86788 0.0 16.2139    
cufflinks 5.25983 0.0 20.7533    
cufflinks 4.9194 0.0 19.4231    
cufflinks 12.0169 0.0 40.0103   High
cufflinks 7.16158 0.0 25.8221    
cufflinks 4.00551 0.0 16.4295    
cufflinks 10.8793 0.0 36.8075   High
cufflinks 1.73707 0.0 8.23652   Low
cufflinks 6.79345 0.0 25.088    

0 Strain