Gene : Phvul.007G171333 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11514:SF28 - TRANSCRIPTION FACTOR TT8 Genomic Order:  1573
Name:  ? Phvul.007G171333 Secondary Identifier:  ? PAC:37167061
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G171333 0.5kb upstream 0.5kb upstream 14524 true Chr07: 28751632-28766155 Phaseolus vulgaris
Phvul.007G171333 0.5kb upstream 0.5kb upstream 500 false Chr07: 28751632-28752131 Phaseolus vulgaris
Phvul.007G171333 0.5kb downstream 0.5kb downstream 14524 true Chr07: 28752132-28766655 Phaseolus vulgaris
Phvul.007G171333 0.5kb downstream 0.5kb downstream 500 false Chr07: 28766156-28766655 Phaseolus vulgaris
Phvul.007G171333 1.0kb upstream 1.0kb upstream 15024 true Chr07: 28751132-28766155 Phaseolus vulgaris
Phvul.007G171333 1.0kb upstream 1.0kb upstream 1000 false Chr07: 28751132-28752131 Phaseolus vulgaris
Phvul.007G171333 1.0kb downstream 1.0kb downstream 15024 true Chr07: 28752132-28767155 Phaseolus vulgaris
Phvul.007G171333 1.0kb downstream 1.0kb downstream 1000 false Chr07: 28766156-28767155 Phaseolus vulgaris
Phvul.007G171333 2.0kb upstream 2.0kb upstream 16024 true Chr07: 28750132-28766155 Phaseolus vulgaris
Phvul.007G171333 2.0kb upstream 2.0kb upstream 2000 false Chr07: 28750132-28752131 Phaseolus vulgaris
Phvul.007G171333 2.0kb downstream 2.0kb downstream 16024 true Chr07: 28752132-28768155 Phaseolus vulgaris
Phvul.007G171333 2.0kb downstream 2.0kb downstream 2000 false Chr07: 28766156-28768155 Phaseolus vulgaris
Phvul.007G171333 5.0kb upstream 5.0kb upstream 19024 true Chr07: 28747132-28766155 Phaseolus vulgaris
Phvul.007G171333 5.0kb upstream 5.0kb upstream 5000 false Chr07: 28747132-28752131 Phaseolus vulgaris
Phvul.007G171333 5.0kb downstream 5.0kb downstream 19024 true Chr07: 28752132-28771155 Phaseolus vulgaris
Phvul.007G171333 5.0kb downstream 5.0kb downstream 5000 false Chr07: 28766156-28771155 Phaseolus vulgaris
Phvul.007G171333 10.0kb upstream 10.0kb upstream 24024 true Chr07: 28742132-28766155 Phaseolus vulgaris
Phvul.007G171333 10.0kb upstream 10.0kb upstream 10000 false Chr07: 28742132-28752131 Phaseolus vulgaris
Phvul.007G171333 10.0kb downstream 10.0kb downstream 24024 true Chr07: 28752132-28776155 Phaseolus vulgaris
Phvul.007G171333 10.0kb downstream 10.0kb downstream 10000 false Chr07: 28766156-28776155 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309352 5265 Fabidae View MSA
124064809 5270 Rosid View MSA
123747092 5271 Pentapetalae View MSA
122794545 5272 Eudicot View MSA
122045232 5273 Angiosperm View MSA
121347746 5274 Embryophyte View MSA
123380612 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.5756 0.0 43.025   High
cufflinks 10.3613 0.0 26.8179   High
cufflinks 0.0644339 0.0 0.264078 Low Low
cufflinks 11.355 0.0 29.3536   High
cufflinks 0.775484 0.0 2.51064    
cufflinks 0.124917 0.0 0.48414 Low  
cufflinks 0.149036 0.0 0.564432 Low  
cufflinks 0.0719801 0.0 0.290889 Low Low
cufflinks 0.134194 0.0 0.51306 Low  
cufflinks 3.43785 0.0 9.53184    
cufflinks 0.930008 0.0 2.9438    

0 Strain