Gene : Phvul.007G169500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12550:SF5 - HUA2-LIKE PROTEIN 2-RELATED Genomic Order:  1557
Name:  ? Phvul.007G169500 Secondary Identifier:  ? PAC:37167333
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G169500 0.5kb upstream 0.5kb upstream 12875 true Chr07: 28603520-28616394 Phaseolus vulgaris
Phvul.007G169500 0.5kb upstream 0.5kb upstream 500 false Chr07: 28603520-28604019 Phaseolus vulgaris
Phvul.007G169500 0.5kb downstream 0.5kb downstream 12875 true Chr07: 28604020-28616894 Phaseolus vulgaris
Phvul.007G169500 0.5kb downstream 0.5kb downstream 500 false Chr07: 28616395-28616894 Phaseolus vulgaris
Phvul.007G169500 1.0kb upstream 1.0kb upstream 13375 true Chr07: 28603020-28616394 Phaseolus vulgaris
Phvul.007G169500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 28603020-28604019 Phaseolus vulgaris
Phvul.007G169500 1.0kb downstream 1.0kb downstream 13375 true Chr07: 28604020-28617394 Phaseolus vulgaris
Phvul.007G169500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 28616395-28617394 Phaseolus vulgaris
Phvul.007G169500 2.0kb upstream 2.0kb upstream 14375 true Chr07: 28602020-28616394 Phaseolus vulgaris
Phvul.007G169500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 28602020-28604019 Phaseolus vulgaris
Phvul.007G169500 2.0kb downstream 2.0kb downstream 14375 true Chr07: 28604020-28618394 Phaseolus vulgaris
Phvul.007G169500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 28616395-28618394 Phaseolus vulgaris
Phvul.007G169500 5.0kb upstream 5.0kb upstream 17375 true Chr07: 28599020-28616394 Phaseolus vulgaris
Phvul.007G169500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 28599020-28604019 Phaseolus vulgaris
Phvul.007G169500 5.0kb downstream 5.0kb downstream 17375 true Chr07: 28604020-28621394 Phaseolus vulgaris
Phvul.007G169500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 28616395-28621394 Phaseolus vulgaris
Phvul.007G169500 10.0kb upstream 10.0kb upstream 22375 true Chr07: 28594020-28616394 Phaseolus vulgaris
Phvul.007G169500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 28594020-28604019 Phaseolus vulgaris
Phvul.007G169500 10.0kb downstream 10.0kb downstream 22375 true Chr07: 28604020-28626394 Phaseolus vulgaris
Phvul.007G169500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 28616395-28626394 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307172 5265 Fabidae View MSA
124068925 5270 Rosid View MSA
123739923 5271 Pentapetalae View MSA
122787365 5272 Eudicot View MSA
122045981 5273 Angiosperm View MSA
121348471 5274 Embryophyte View MSA
123424079 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.8341 0.0 12.7623   Low
cufflinks 10.8691 0.0 28.1096    
cufflinks 12.7543 0.0 33.1109    
cufflinks 5.2458 0.0 13.8416   Low
cufflinks 10.9633 0.0 28.3484    
cufflinks 13.5714 0.0 35.2645    
cufflinks 13.0542 0.0 33.8951    
cufflinks 13.0098 0.0 33.8044    
cufflinks 12.9747 0.0 33.6582    
cufflinks 18.9504 0.0 50.0063   High
cufflinks 8.25849 0.0 21.3825    

0 Strain