Gene : Phvul.007G169601 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11592:SF17 - GLUTATHIONE PEROXIDASE 4-RELATED Genomic Order:  1558
Name:  ? Phvul.007G169601 Secondary Identifier:  ? PAC:37167052
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris DETOX1-PWY-1 Phaseolus vulgaris pathologic  
Pvulgaris PWY-4081 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G169601 0.5kb upstream 0.5kb upstream 3542 true Chr07: 28621658-28625199 Phaseolus vulgaris
Phvul.007G169601 0.5kb upstream 0.5kb upstream 500 false Chr07: 28621658-28622157 Phaseolus vulgaris
Phvul.007G169601 0.5kb downstream 0.5kb downstream 3542 true Chr07: 28622158-28625699 Phaseolus vulgaris
Phvul.007G169601 0.5kb downstream 0.5kb downstream 500 false Chr07: 28625200-28625699 Phaseolus vulgaris
Phvul.007G169601 1.0kb upstream 1.0kb upstream 4042 true Chr07: 28621158-28625199 Phaseolus vulgaris
Phvul.007G169601 1.0kb upstream 1.0kb upstream 1000 false Chr07: 28621158-28622157 Phaseolus vulgaris
Phvul.007G169601 1.0kb downstream 1.0kb downstream 4042 true Chr07: 28622158-28626199 Phaseolus vulgaris
Phvul.007G169601 1.0kb downstream 1.0kb downstream 1000 false Chr07: 28625200-28626199 Phaseolus vulgaris
Phvul.007G169601 2.0kb upstream 2.0kb upstream 5042 true Chr07: 28620158-28625199 Phaseolus vulgaris
Phvul.007G169601 2.0kb upstream 2.0kb upstream 2000 false Chr07: 28620158-28622157 Phaseolus vulgaris
Phvul.007G169601 2.0kb downstream 2.0kb downstream 5042 true Chr07: 28622158-28627199 Phaseolus vulgaris
Phvul.007G169601 2.0kb downstream 2.0kb downstream 2000 false Chr07: 28625200-28627199 Phaseolus vulgaris
Phvul.007G169601 5.0kb upstream 5.0kb upstream 8042 true Chr07: 28617158-28625199 Phaseolus vulgaris
Phvul.007G169601 5.0kb upstream 5.0kb upstream 5000 false Chr07: 28617158-28622157 Phaseolus vulgaris
Phvul.007G169601 5.0kb downstream 5.0kb downstream 8042 true Chr07: 28622158-28630199 Phaseolus vulgaris
Phvul.007G169601 5.0kb downstream 5.0kb downstream 5000 false Chr07: 28625200-28630199 Phaseolus vulgaris
Phvul.007G169601 10.0kb upstream 10.0kb upstream 13042 true Chr07: 28612158-28625199 Phaseolus vulgaris
Phvul.007G169601 10.0kb upstream 10.0kb upstream 10000 false Chr07: 28612158-28622157 Phaseolus vulgaris
Phvul.007G169601 10.0kb downstream 10.0kb downstream 13042 true Chr07: 28622158-28635199 Phaseolus vulgaris
Phvul.007G169601 10.0kb downstream 10.0kb downstream 10000 false Chr07: 28625200-28635199 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026200 5273 Angiosperm View MSA
122297637 5265 Fabidae View MSA
124036094 5270 Rosid View MSA
123743608 5271 Pentapetalae View MSA
122796492 5272 Eudicot View MSA
121296225 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0725066 0.0 0.359343 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.118074 0.0 0.551488 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.312389 0.0 1.32998 Low  
cufflinks 0.163621 0.0 0.736933 Low  
cufflinks 8.07663 0.0 25.4877   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain