Gene : Phvul.005G026000 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10891//PTHR10891:SF590 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  257
Name:  ? Phvul.005G026000 Secondary Identifier:  ? PAC:37152385
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G026000 0.5kb upstream 0.5kb upstream 1306 true Chr05: 2380796-2382101 Phaseolus vulgaris
Phvul.005G026000 0.5kb upstream 0.5kb upstream 500 false Chr05: 2381602-2382101 Phaseolus vulgaris
Phvul.005G026000 0.5kb downstream 0.5kb downstream 1306 true Chr05: 2380296-2381601 Phaseolus vulgaris
Phvul.005G026000 0.5kb downstream 0.5kb downstream 500 false Chr05: 2380296-2380795 Phaseolus vulgaris
Phvul.005G026000 1.0kb upstream 1.0kb upstream 1806 true Chr05: 2380796-2382601 Phaseolus vulgaris
Phvul.005G026000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2381602-2382601 Phaseolus vulgaris
Phvul.005G026000 1.0kb downstream 1.0kb downstream 1806 true Chr05: 2379796-2381601 Phaseolus vulgaris
Phvul.005G026000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2379796-2380795 Phaseolus vulgaris
Phvul.005G026000 2.0kb upstream 2.0kb upstream 2806 true Chr05: 2380796-2383601 Phaseolus vulgaris
Phvul.005G026000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2381602-2383601 Phaseolus vulgaris
Phvul.005G026000 2.0kb downstream 2.0kb downstream 2806 true Chr05: 2378796-2381601 Phaseolus vulgaris
Phvul.005G026000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2378796-2380795 Phaseolus vulgaris
Phvul.005G026000 5.0kb upstream 5.0kb upstream 5806 true Chr05: 2380796-2386601 Phaseolus vulgaris
Phvul.005G026000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2381602-2386601 Phaseolus vulgaris
Phvul.005G026000 5.0kb downstream 5.0kb downstream 5806 true Chr05: 2375796-2381601 Phaseolus vulgaris
Phvul.005G026000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2375796-2380795 Phaseolus vulgaris
Phvul.005G026000 10.0kb upstream 10.0kb upstream 10806 true Chr05: 2380796-2391601 Phaseolus vulgaris
Phvul.005G026000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2381602-2391601 Phaseolus vulgaris
Phvul.005G026000 10.0kb downstream 10.0kb downstream 10806 true Chr05: 2370796-2381601 Phaseolus vulgaris
Phvul.005G026000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2370796-2380795 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253799 5265 Fabidae View MSA
123996246 5270 Rosid View MSA
123747964 5271 Pentapetalae View MSA
122795822 5272 Eudicot View MSA
122046502 5273 Angiosperm View MSA
121351910 5274 Embryophyte View MSA
123382405 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.68246 0.0 5.99179    
cufflinks 0.189019 0.0 0.810458 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.200318 0.0 0.864177 Low  
cufflinks 0.162664 0.0 0.712447 Low  
cufflinks 0.575774 0.0 2.25128    
cufflinks 8.59588 0.0 25.5617   High
cufflinks 5.88392 0.0 18.247   High
cufflinks 0.00261612 0.0 0.0265004 Low Low
cufflinks 4.48834 0.0 14.4377    
cufflinks 0.236348 0.0 0.996667 Low  

0 Strain