Gene : Phvul.005G027100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR26402//PTHR26402:SF574 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM // SUBFAMILY NOT NAMED Genomic Order:  269
Name:  ? Phvul.005G027100 Secondary Identifier:  ? PAC:37154017
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G027100 0.5kb upstream 0.5kb upstream 2274 true Chr05: 2510581-2512854 Phaseolus vulgaris
Phvul.005G027100 0.5kb upstream 0.5kb upstream 500 false Chr05: 2512355-2512854 Phaseolus vulgaris
Phvul.005G027100 0.5kb downstream 0.5kb downstream 2274 true Chr05: 2510081-2512354 Phaseolus vulgaris
Phvul.005G027100 0.5kb downstream 0.5kb downstream 500 false Chr05: 2510081-2510580 Phaseolus vulgaris
Phvul.005G027100 1.0kb upstream 1.0kb upstream 2774 true Chr05: 2510581-2513354 Phaseolus vulgaris
Phvul.005G027100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2512355-2513354 Phaseolus vulgaris
Phvul.005G027100 1.0kb downstream 1.0kb downstream 2774 true Chr05: 2509581-2512354 Phaseolus vulgaris
Phvul.005G027100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2509581-2510580 Phaseolus vulgaris
Phvul.005G027100 2.0kb upstream 2.0kb upstream 3774 true Chr05: 2510581-2514354 Phaseolus vulgaris
Phvul.005G027100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2512355-2514354 Phaseolus vulgaris
Phvul.005G027100 2.0kb downstream 2.0kb downstream 3774 true Chr05: 2508581-2512354 Phaseolus vulgaris
Phvul.005G027100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2508581-2510580 Phaseolus vulgaris
Phvul.005G027100 5.0kb upstream 5.0kb upstream 6774 true Chr05: 2510581-2517354 Phaseolus vulgaris
Phvul.005G027100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2512355-2517354 Phaseolus vulgaris
Phvul.005G027100 5.0kb downstream 5.0kb downstream 6774 true Chr05: 2505581-2512354 Phaseolus vulgaris
Phvul.005G027100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2505581-2510580 Phaseolus vulgaris
Phvul.005G027100 10.0kb upstream 10.0kb upstream 11774 true Chr05: 2510581-2522354 Phaseolus vulgaris
Phvul.005G027100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2512355-2522354 Phaseolus vulgaris
Phvul.005G027100 10.0kb downstream 10.0kb downstream 11774 true Chr05: 2500581-2512354 Phaseolus vulgaris
Phvul.005G027100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2500581-2510580 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303928 5265 Fabidae View MSA
124073776 5270 Rosid View MSA
123749926 5271 Pentapetalae View MSA
122796134 5272 Eudicot View MSA
122050729 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349796 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.904768 0.0 3.3484   Low
cufflinks 1.25811 0.0 4.53564    
cufflinks 25.1001 0.0 66.23   High
cufflinks 0.791438 0.0 2.98241   Low
cufflinks 27.8228 0.0 73.5845   High
cufflinks 2.90662 0.0 9.56829    
cufflinks 12.0146 0.0 33.7087    
cufflinks 32.0168 0.0 83.3416 High High
cufflinks 9.30892 0.0 26.8395    
cufflinks 0.735551 0.0 2.78263   Low
cufflinks 13.2641 0.0 37.1941    

0 Strain