Gene : Phvul.007G174200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24362//PTHR24362:SF277 - SERINE/THREONINE-PROTEIN KINASE NEK // SUBFAMILY NOT NAMED Genomic Order:  1601
Name:  ? Phvul.007G174200 Secondary Identifier:  ? PAC:37165442
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G174200 0.5kb upstream 0.5kb upstream 7110 true Chr07: 29223579-29230688 Phaseolus vulgaris
Phvul.007G174200 0.5kb upstream 0.5kb upstream 500 false Chr07: 29223579-29224078 Phaseolus vulgaris
Phvul.007G174200 0.5kb downstream 0.5kb downstream 7110 true Chr07: 29224079-29231188 Phaseolus vulgaris
Phvul.007G174200 0.5kb downstream 0.5kb downstream 500 false Chr07: 29230689-29231188 Phaseolus vulgaris
Phvul.007G174200 1.0kb upstream 1.0kb upstream 7610 true Chr07: 29223079-29230688 Phaseolus vulgaris
Phvul.007G174200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 29223079-29224078 Phaseolus vulgaris
Phvul.007G174200 1.0kb downstream 1.0kb downstream 7610 true Chr07: 29224079-29231688 Phaseolus vulgaris
Phvul.007G174200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 29230689-29231688 Phaseolus vulgaris
Phvul.007G174200 2.0kb upstream 2.0kb upstream 8610 true Chr07: 29222079-29230688 Phaseolus vulgaris
Phvul.007G174200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 29222079-29224078 Phaseolus vulgaris
Phvul.007G174200 2.0kb downstream 2.0kb downstream 8610 true Chr07: 29224079-29232688 Phaseolus vulgaris
Phvul.007G174200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 29230689-29232688 Phaseolus vulgaris
Phvul.007G174200 5.0kb upstream 5.0kb upstream 11610 true Chr07: 29219079-29230688 Phaseolus vulgaris
Phvul.007G174200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 29219079-29224078 Phaseolus vulgaris
Phvul.007G174200 5.0kb downstream 5.0kb downstream 11610 true Chr07: 29224079-29235688 Phaseolus vulgaris
Phvul.007G174200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 29230689-29235688 Phaseolus vulgaris
Phvul.007G174200 10.0kb upstream 10.0kb upstream 16610 true Chr07: 29214079-29230688 Phaseolus vulgaris
Phvul.007G174200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 29214079-29224078 Phaseolus vulgaris
Phvul.007G174200 10.0kb downstream 10.0kb downstream 16610 true Chr07: 29224079-29240688 Phaseolus vulgaris
Phvul.007G174200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 29230689-29240688 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302040 5265 Fabidae View MSA
124070127 5270 Rosid View MSA
123743821 5271 Pentapetalae View MSA
122789481 5272 Eudicot View MSA
122043022 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310065 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.72382 0.0 13.1609    
cufflinks 8.88377 0.0 30.5184   High
cufflinks 3.3974 0.0 12.2482    
cufflinks 4.19991 0.0 14.5369    
cufflinks 8.57394 0.0 29.9709   High
cufflinks 8.97112 0.0 30.8133   High
cufflinks 5.96742 0.0 22.1856    
cufflinks 3.25002 0.0 11.7355   Low
cufflinks 3.76241 0.0 13.5448    
cufflinks 3.61198 0.0 12.8671    
cufflinks 8.42853 0.0 29.4048   High

0 Strain