Gene : Phvul.007G173900 P. vulgaris v2.1
Defline:  (1 of 1) K01968 - 3-methylcrotonyl-CoA carboxylase alpha subunit (E6.4.1.4A) Genomic Order:  1598
Name:  ? Phvul.007G173900 Secondary Identifier:  ? PAC:37164546
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris LEU-DEG2-PWY Phaseolus vulgaris pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G173900 0.5kb upstream 0.5kb upstream 11391 true Chr07: 29131591-29142981 Phaseolus vulgaris
Phvul.007G173900 0.5kb upstream 0.5kb upstream 500 false Chr07: 29142482-29142981 Phaseolus vulgaris
Phvul.007G173900 0.5kb downstream 0.5kb downstream 11391 true Chr07: 29131091-29142481 Phaseolus vulgaris
Phvul.007G173900 0.5kb downstream 0.5kb downstream 500 false Chr07: 29131091-29131590 Phaseolus vulgaris
Phvul.007G173900 1.0kb upstream 1.0kb upstream 11891 true Chr07: 29131591-29143481 Phaseolus vulgaris
Phvul.007G173900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 29142482-29143481 Phaseolus vulgaris
Phvul.007G173900 1.0kb downstream 1.0kb downstream 11891 true Chr07: 29130591-29142481 Phaseolus vulgaris
Phvul.007G173900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 29130591-29131590 Phaseolus vulgaris
Phvul.007G173900 2.0kb upstream 2.0kb upstream 12891 true Chr07: 29131591-29144481 Phaseolus vulgaris
Phvul.007G173900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 29142482-29144481 Phaseolus vulgaris
Phvul.007G173900 2.0kb downstream 2.0kb downstream 12891 true Chr07: 29129591-29142481 Phaseolus vulgaris
Phvul.007G173900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 29129591-29131590 Phaseolus vulgaris
Phvul.007G173900 5.0kb upstream 5.0kb upstream 15891 true Chr07: 29131591-29147481 Phaseolus vulgaris
Phvul.007G173900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 29142482-29147481 Phaseolus vulgaris
Phvul.007G173900 5.0kb downstream 5.0kb downstream 15891 true Chr07: 29126591-29142481 Phaseolus vulgaris
Phvul.007G173900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 29126591-29131590 Phaseolus vulgaris
Phvul.007G173900 10.0kb upstream 10.0kb upstream 20891 true Chr07: 29131591-29152481 Phaseolus vulgaris
Phvul.007G173900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 29142482-29152481 Phaseolus vulgaris
Phvul.007G173900 10.0kb downstream 10.0kb downstream 20891 true Chr07: 29121591-29142481 Phaseolus vulgaris
Phvul.007G173900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 29121591-29131590 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303666 5265 Fabidae View MSA
124062314 5270 Rosid View MSA
123743627 5271 Pentapetalae View MSA
122788393 5272 Eudicot View MSA
122046633 5273 Angiosperm View MSA
121344540 5274 Embryophyte View MSA
123425779 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.7694 0.0 67.1051   High
cufflinks 17.385 0.0 55.5045    
cufflinks 10.3678 0.0 33.288    
cufflinks 9.20903 0.0 26.2456    
cufflinks 14.5883 0.0 46.4819    
cufflinks 7.23094 0.0 24.156   Low
cufflinks 6.86926 0.0 23.0007   Low
cufflinks 7.77209 0.0 25.5492    
cufflinks 24.2602 0.0 79.5045   High
cufflinks 16.5709 0.0 52.775    
cufflinks 7.22394 0.0 21.0858   Low

0 Strain