Gene : Phvul.007G172800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13087 - NF-KAPPA B ACTIVATING PROTEIN Genomic Order:  1587
Name:  ? Phvul.007G172800 Secondary Identifier:  ? PAC:37165249
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G172800 0.5kb upstream 0.5kb upstream 2338 true Chr07: 28967668-28970005 Phaseolus vulgaris
Phvul.007G172800 0.5kb upstream 0.5kb upstream 500 false Chr07: 28969506-28970005 Phaseolus vulgaris
Phvul.007G172800 0.5kb downstream 0.5kb downstream 2338 true Chr07: 28967168-28969505 Phaseolus vulgaris
Phvul.007G172800 0.5kb downstream 0.5kb downstream 500 false Chr07: 28967168-28967667 Phaseolus vulgaris
Phvul.007G172800 1.0kb upstream 1.0kb upstream 2838 true Chr07: 28967668-28970505 Phaseolus vulgaris
Phvul.007G172800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 28969506-28970505 Phaseolus vulgaris
Phvul.007G172800 1.0kb downstream 1.0kb downstream 2838 true Chr07: 28966668-28969505 Phaseolus vulgaris
Phvul.007G172800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 28966668-28967667 Phaseolus vulgaris
Phvul.007G172800 2.0kb upstream 2.0kb upstream 3838 true Chr07: 28967668-28971505 Phaseolus vulgaris
Phvul.007G172800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 28969506-28971505 Phaseolus vulgaris
Phvul.007G172800 2.0kb downstream 2.0kb downstream 3838 true Chr07: 28965668-28969505 Phaseolus vulgaris
Phvul.007G172800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 28965668-28967667 Phaseolus vulgaris
Phvul.007G172800 5.0kb upstream 5.0kb upstream 6838 true Chr07: 28967668-28974505 Phaseolus vulgaris
Phvul.007G172800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 28969506-28974505 Phaseolus vulgaris
Phvul.007G172800 5.0kb downstream 5.0kb downstream 6838 true Chr07: 28962668-28969505 Phaseolus vulgaris
Phvul.007G172800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 28962668-28967667 Phaseolus vulgaris
Phvul.007G172800 10.0kb upstream 10.0kb upstream 11838 true Chr07: 28967668-28979505 Phaseolus vulgaris
Phvul.007G172800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 28969506-28979505 Phaseolus vulgaris
Phvul.007G172800 10.0kb downstream 10.0kb downstream 11838 true Chr07: 28957668-28969505 Phaseolus vulgaris
Phvul.007G172800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 28957668-28967667 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304024 5265 Fabidae View MSA
124063299 5270 Rosid View MSA
123739958 5271 Pentapetalae View MSA
122786035 5272 Eudicot View MSA
122046016 5273 Angiosperm View MSA
121348345 5274 Embryophyte View MSA
123426799 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.5997 0.0 69.1687    
cufflinks 31.4308 0.0 82.1953    
cufflinks 19.4458 0.0 50.2642   Low
cufflinks 21.2393 0.0 54.9153    
cufflinks 30.7658 0.0 80.2738    
cufflinks 23.0826 0.0 59.7669    
cufflinks 21.1547 0.0 54.7572    
cufflinks 20.2651 0.0 52.4049   Low
cufflinks 24.9758 0.0 64.8793    
cufflinks 42.3377 0.0 112.771 High High
cufflinks 33.9638 0.0 89.2699   High

0 Strain