Gene : Phvul.005G029900 P. vulgaris v2.1
Defline:  (1 of 1) K08334 - beclin 1 (BECN1, VPS30, ATG6) Genomic Order:  292
Name:  ? Phvul.005G029900 Secondary Identifier:  ? PAC:37154181
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G029900 0.5kb upstream 0.5kb upstream 7712 true Chr05: 2766098-2773809 Phaseolus vulgaris
Phvul.005G029900 0.5kb upstream 0.5kb upstream 500 false Chr05: 2766098-2766597 Phaseolus vulgaris
Phvul.005G029900 0.5kb downstream 0.5kb downstream 7712 true Chr05: 2766598-2774309 Phaseolus vulgaris
Phvul.005G029900 0.5kb downstream 0.5kb downstream 500 false Chr05: 2773810-2774309 Phaseolus vulgaris
Phvul.005G029900 1.0kb upstream 1.0kb upstream 8212 true Chr05: 2765598-2773809 Phaseolus vulgaris
Phvul.005G029900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2765598-2766597 Phaseolus vulgaris
Phvul.005G029900 1.0kb downstream 1.0kb downstream 8212 true Chr05: 2766598-2774809 Phaseolus vulgaris
Phvul.005G029900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2773810-2774809 Phaseolus vulgaris
Phvul.005G029900 2.0kb upstream 2.0kb upstream 9212 true Chr05: 2764598-2773809 Phaseolus vulgaris
Phvul.005G029900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2764598-2766597 Phaseolus vulgaris
Phvul.005G029900 2.0kb downstream 2.0kb downstream 9212 true Chr05: 2766598-2775809 Phaseolus vulgaris
Phvul.005G029900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2773810-2775809 Phaseolus vulgaris
Phvul.005G029900 5.0kb upstream 5.0kb upstream 12212 true Chr05: 2761598-2773809 Phaseolus vulgaris
Phvul.005G029900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2761598-2766597 Phaseolus vulgaris
Phvul.005G029900 5.0kb downstream 5.0kb downstream 12212 true Chr05: 2766598-2778809 Phaseolus vulgaris
Phvul.005G029900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2773810-2778809 Phaseolus vulgaris
Phvul.005G029900 10.0kb upstream 10.0kb upstream 17212 true Chr05: 2756598-2773809 Phaseolus vulgaris
Phvul.005G029900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2756598-2766597 Phaseolus vulgaris
Phvul.005G029900 10.0kb downstream 10.0kb downstream 17212 true Chr05: 2766598-2783809 Phaseolus vulgaris
Phvul.005G029900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2773810-2783809 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300464 5265 Fabidae View MSA
124064033 5270 Rosid View MSA
123737768 5271 Pentapetalae View MSA
122791932 5272 Eudicot View MSA
122047778 5273 Angiosperm View MSA
121344553 5274 Embryophyte View MSA
123428819 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.5036 0.0 27.9073    
cufflinks 7.3026 0.0 20.0344   Low
cufflinks 12.3179 0.0 32.4827    
cufflinks 6.13375 0.0 17.1186   Low
cufflinks 10.8785 0.0 28.9617    
cufflinks 8.81119 0.0 23.7997    
cufflinks 13.1583 0.0 34.4945   High
cufflinks 10.5714 0.0 28.1171    
cufflinks 12.0346 0.0 31.7304    
cufflinks 13.1221 0.0 34.4524   High
cufflinks 10.8306 0.0 28.8138    

0 Strain