Gene : Phvul.007G175400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23050//PTHR23050:SF211 - CALCIUM BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1615
Name:  ? Phvul.007G175400 Secondary Identifier:  ? PAC:37167192
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G175400 0.5kb upstream 0.5kb upstream 1319 true Chr07: 29438099-29439417 Phaseolus vulgaris
Phvul.007G175400 0.5kb upstream 0.5kb upstream 500 false Chr07: 29438918-29439417 Phaseolus vulgaris
Phvul.007G175400 0.5kb downstream 0.5kb downstream 1319 true Chr07: 29437599-29438917 Phaseolus vulgaris
Phvul.007G175400 0.5kb downstream 0.5kb downstream 500 false Chr07: 29437599-29438098 Phaseolus vulgaris
Phvul.007G175400 1.0kb upstream 1.0kb upstream 1819 true Chr07: 29438099-29439917 Phaseolus vulgaris
Phvul.007G175400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 29438918-29439917 Phaseolus vulgaris
Phvul.007G175400 1.0kb downstream 1.0kb downstream 1819 true Chr07: 29437099-29438917 Phaseolus vulgaris
Phvul.007G175400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 29437099-29438098 Phaseolus vulgaris
Phvul.007G175400 2.0kb upstream 2.0kb upstream 2819 true Chr07: 29438099-29440917 Phaseolus vulgaris
Phvul.007G175400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 29438918-29440917 Phaseolus vulgaris
Phvul.007G175400 2.0kb downstream 2.0kb downstream 2819 true Chr07: 29436099-29438917 Phaseolus vulgaris
Phvul.007G175400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 29436099-29438098 Phaseolus vulgaris
Phvul.007G175400 5.0kb upstream 5.0kb upstream 5819 true Chr07: 29438099-29443917 Phaseolus vulgaris
Phvul.007G175400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 29438918-29443917 Phaseolus vulgaris
Phvul.007G175400 5.0kb downstream 5.0kb downstream 5819 true Chr07: 29433099-29438917 Phaseolus vulgaris
Phvul.007G175400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 29433099-29438098 Phaseolus vulgaris
Phvul.007G175400 10.0kb upstream 10.0kb upstream 10819 true Chr07: 29438099-29448917 Phaseolus vulgaris
Phvul.007G175400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 29438918-29448917 Phaseolus vulgaris
Phvul.007G175400 10.0kb downstream 10.0kb downstream 10819 true Chr07: 29428099-29438917 Phaseolus vulgaris
Phvul.007G175400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 29428099-29438098 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779373 5273 Angiosperm View MSA
122299319 5265 Fabidae View MSA
124070744 5270 Rosid View MSA
123742543 5271 Pentapetalae View MSA
122770310 5272 Eudicot View MSA
121051039 5274 Embryophyte View MSA
123091145 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.137818 0.0 0.674965 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain