Gene : Phvul.005G031500 P. vulgaris v2.1
Defline:  (1 of 2) K09841 - xanthoxin dehydrogenase (ABA2) Genomic Order:  309
Name:  ? Phvul.005G031500 Secondary Identifier:  ? PAC:37152585
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-695 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G031500 0.5kb upstream 0.5kb upstream 3871 true Chr05: 2915493-2919363 Phaseolus vulgaris
Phvul.005G031500 0.5kb upstream 0.5kb upstream 500 false Chr05: 2915493-2915992 Phaseolus vulgaris
Phvul.005G031500 0.5kb downstream 0.5kb downstream 3871 true Chr05: 2915993-2919863 Phaseolus vulgaris
Phvul.005G031500 0.5kb downstream 0.5kb downstream 500 false Chr05: 2919364-2919863 Phaseolus vulgaris
Phvul.005G031500 1.0kb upstream 1.0kb upstream 4371 true Chr05: 2914993-2919363 Phaseolus vulgaris
Phvul.005G031500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2914993-2915992 Phaseolus vulgaris
Phvul.005G031500 1.0kb downstream 1.0kb downstream 4371 true Chr05: 2915993-2920363 Phaseolus vulgaris
Phvul.005G031500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2919364-2920363 Phaseolus vulgaris
Phvul.005G031500 2.0kb upstream 2.0kb upstream 5371 true Chr05: 2913993-2919363 Phaseolus vulgaris
Phvul.005G031500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2913993-2915992 Phaseolus vulgaris
Phvul.005G031500 2.0kb downstream 2.0kb downstream 5371 true Chr05: 2915993-2921363 Phaseolus vulgaris
Phvul.005G031500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2919364-2921363 Phaseolus vulgaris
Phvul.005G031500 5.0kb upstream 5.0kb upstream 8371 true Chr05: 2910993-2919363 Phaseolus vulgaris
Phvul.005G031500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2910993-2915992 Phaseolus vulgaris
Phvul.005G031500 5.0kb downstream 5.0kb downstream 8371 true Chr05: 2915993-2924363 Phaseolus vulgaris
Phvul.005G031500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2919364-2924363 Phaseolus vulgaris
Phvul.005G031500 10.0kb upstream 10.0kb upstream 13371 true Chr05: 2905993-2919363 Phaseolus vulgaris
Phvul.005G031500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2905993-2915992 Phaseolus vulgaris
Phvul.005G031500 10.0kb downstream 10.0kb downstream 13371 true Chr05: 2915993-2929363 Phaseolus vulgaris
Phvul.005G031500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2919364-2929363 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299815 5265 Fabidae View MSA
124070335 5270 Rosid View MSA
123753766 5271 Pentapetalae View MSA
122796272 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.5768 0.0 96.0498    
cufflinks 28.0666 0.0 80.5431    
cufflinks 18.4262 0.0 56.5258    
cufflinks 70.4792 0.0 202.067 High High
cufflinks 24.9155 0.0 71.8345    
cufflinks 15.2124 0.0 47.3305    
cufflinks 11.8522 0.0 37.9603   Low
cufflinks 10.5449 0.0 33.6431   Low
cufflinks 10.8798 0.0 34.781   Low
cufflinks 36.1097 0.0 114.632 High  
cufflinks 25.6111 0.0 73.1411    

0 Strain