Gene : Phvul.005G032600 P. vulgaris v2.1
Defline:  (1 of 4) PTHR21495:SF59 - DIRIGENT PROTEIN 20-RELATED Genomic Order:  320
Name:  ? Phvul.005G032600 Secondary Identifier:  ? PAC:37154324
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G032600 0.5kb upstream 0.5kb upstream 1336 true Chr05: 3005104-3006439 Phaseolus vulgaris
Phvul.005G032600 0.5kb upstream 0.5kb upstream 500 false Chr05: 3005104-3005603 Phaseolus vulgaris
Phvul.005G032600 0.5kb downstream 0.5kb downstream 1336 true Chr05: 3005604-3006939 Phaseolus vulgaris
Phvul.005G032600 0.5kb downstream 0.5kb downstream 500 false Chr05: 3006440-3006939 Phaseolus vulgaris
Phvul.005G032600 1.0kb upstream 1.0kb upstream 1836 true Chr05: 3004604-3006439 Phaseolus vulgaris
Phvul.005G032600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3004604-3005603 Phaseolus vulgaris
Phvul.005G032600 1.0kb downstream 1.0kb downstream 1836 true Chr05: 3005604-3007439 Phaseolus vulgaris
Phvul.005G032600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3006440-3007439 Phaseolus vulgaris
Phvul.005G032600 2.0kb upstream 2.0kb upstream 2836 true Chr05: 3003604-3006439 Phaseolus vulgaris
Phvul.005G032600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3003604-3005603 Phaseolus vulgaris
Phvul.005G032600 2.0kb downstream 2.0kb downstream 2836 true Chr05: 3005604-3008439 Phaseolus vulgaris
Phvul.005G032600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3006440-3008439 Phaseolus vulgaris
Phvul.005G032600 5.0kb upstream 5.0kb upstream 5836 true Chr05: 3000604-3006439 Phaseolus vulgaris
Phvul.005G032600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3000604-3005603 Phaseolus vulgaris
Phvul.005G032600 5.0kb downstream 5.0kb downstream 5836 true Chr05: 3005604-3011439 Phaseolus vulgaris
Phvul.005G032600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3006440-3011439 Phaseolus vulgaris
Phvul.005G032600 10.0kb upstream 10.0kb upstream 10836 true Chr05: 2995604-3006439 Phaseolus vulgaris
Phvul.005G032600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2995604-3005603 Phaseolus vulgaris
Phvul.005G032600 10.0kb downstream 10.0kb downstream 10836 true Chr05: 3005604-3016439 Phaseolus vulgaris
Phvul.005G032600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3006440-3016439 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297436 5265 Fabidae View MSA
124071880 5270 Rosid View MSA
123745116 5271 Pentapetalae View MSA
122797233 5272 Eudicot View MSA
122051134 5273 Angiosperm View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.7377 0.0 46.0953    
cufflinks 53.7686 0.0 139.056 High  
cufflinks 4.17082 0.0 13.4533    
cufflinks 95.2035 0.0 250.732 High High
cufflinks 38.3534 0.0 99.7489 High  
cufflinks 26.3816 0.0 70.402    
cufflinks 6.28707 0.0 19.1426    
cufflinks 2.87173 0.0 9.66749   Low
cufflinks 2.37382 0.0 8.05655   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 35.6535 0.0 93.0842 High  

0 Strain