Gene : Phvul.005G016200 P. vulgaris v2.1
Defline:  (1 of 1) K11271 - sister chromatid cohesion protein DCC1 (DSCC1, DCC1) Genomic Order:  157
Name:  ? Phvul.005G016200 Secondary Identifier:  ? PAC:37154316
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G016200 0.5kb upstream 0.5kb upstream 3144 true Chr05: 1427172-1430315 Phaseolus vulgaris
Phvul.005G016200 0.5kb upstream 0.5kb upstream 500 false Chr05: 1429816-1430315 Phaseolus vulgaris
Phvul.005G016200 0.5kb downstream 0.5kb downstream 3144 true Chr05: 1426672-1429815 Phaseolus vulgaris
Phvul.005G016200 0.5kb downstream 0.5kb downstream 500 false Chr05: 1426672-1427171 Phaseolus vulgaris
Phvul.005G016200 1.0kb upstream 1.0kb upstream 3644 true Chr05: 1427172-1430815 Phaseolus vulgaris
Phvul.005G016200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1429816-1430815 Phaseolus vulgaris
Phvul.005G016200 1.0kb downstream 1.0kb downstream 3644 true Chr05: 1426172-1429815 Phaseolus vulgaris
Phvul.005G016200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1426172-1427171 Phaseolus vulgaris
Phvul.005G016200 2.0kb upstream 2.0kb upstream 4644 true Chr05: 1427172-1431815 Phaseolus vulgaris
Phvul.005G016200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1429816-1431815 Phaseolus vulgaris
Phvul.005G016200 2.0kb downstream 2.0kb downstream 4644 true Chr05: 1425172-1429815 Phaseolus vulgaris
Phvul.005G016200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1425172-1427171 Phaseolus vulgaris
Phvul.005G016200 5.0kb upstream 5.0kb upstream 7644 true Chr05: 1427172-1434815 Phaseolus vulgaris
Phvul.005G016200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1429816-1434815 Phaseolus vulgaris
Phvul.005G016200 5.0kb downstream 5.0kb downstream 7644 true Chr05: 1422172-1429815 Phaseolus vulgaris
Phvul.005G016200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1422172-1427171 Phaseolus vulgaris
Phvul.005G016200 10.0kb upstream 10.0kb upstream 12644 true Chr05: 1427172-1439815 Phaseolus vulgaris
Phvul.005G016200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1429816-1439815 Phaseolus vulgaris
Phvul.005G016200 10.0kb downstream 10.0kb downstream 12644 true Chr05: 1417172-1429815 Phaseolus vulgaris
Phvul.005G016200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1417172-1427171 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301606 5265 Fabidae View MSA
124066083 5270 Rosid View MSA
123738990 5271 Pentapetalae View MSA
122785967 5272 Eudicot View MSA
122045586 5273 Angiosperm View MSA
121346207 5274 Embryophyte View MSA
123425480 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.51466 0.0 5.09453    
cufflinks 2.95976 0.0 9.24472   High
cufflinks 1.2284 0.0 4.22068   Low
cufflinks 1.65673 0.0 5.58182    
cufflinks 2.0943 0.0 6.85448    
cufflinks 1.67842 0.0 5.57973    
cufflinks 2.25981 0.0 7.25275    
cufflinks 2.76032 0.0 8.61641   High
cufflinks 1.93534 0.0 6.3521    
cufflinks 0.777262 0.0 2.8134   Low
cufflinks 2.30441 0.0 7.43815    

0 Strain