Gene : Phvul.007G160600 P. vulgaris v2.1
Defline:  (1 of 4) K15728 - phosphatidate phosphatase LPIN (LPIN) Genomic Order:  1464
Name:  ? Phvul.007G160600 Secondary Identifier:  ? PAC:37165014
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris TRIGLSYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G160600 0.5kb upstream 0.5kb upstream 9451 true Chr07: 27141060-27150510 Phaseolus vulgaris
Phvul.007G160600 0.5kb upstream 0.5kb upstream 500 false Chr07: 27150011-27150510 Phaseolus vulgaris
Phvul.007G160600 0.5kb downstream 0.5kb downstream 9451 true Chr07: 27140560-27150010 Phaseolus vulgaris
Phvul.007G160600 0.5kb downstream 0.5kb downstream 500 false Chr07: 27140560-27141059 Phaseolus vulgaris
Phvul.007G160600 1.0kb upstream 1.0kb upstream 9951 true Chr07: 27141060-27151010 Phaseolus vulgaris
Phvul.007G160600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 27150011-27151010 Phaseolus vulgaris
Phvul.007G160600 1.0kb downstream 1.0kb downstream 9951 true Chr07: 27140060-27150010 Phaseolus vulgaris
Phvul.007G160600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 27140060-27141059 Phaseolus vulgaris
Phvul.007G160600 2.0kb upstream 2.0kb upstream 10951 true Chr07: 27141060-27152010 Phaseolus vulgaris
Phvul.007G160600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 27150011-27152010 Phaseolus vulgaris
Phvul.007G160600 2.0kb downstream 2.0kb downstream 10951 true Chr07: 27139060-27150010 Phaseolus vulgaris
Phvul.007G160600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 27139060-27141059 Phaseolus vulgaris
Phvul.007G160600 5.0kb upstream 5.0kb upstream 13951 true Chr07: 27141060-27155010 Phaseolus vulgaris
Phvul.007G160600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 27150011-27155010 Phaseolus vulgaris
Phvul.007G160600 5.0kb downstream 5.0kb downstream 13951 true Chr07: 27136060-27150010 Phaseolus vulgaris
Phvul.007G160600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 27136060-27141059 Phaseolus vulgaris
Phvul.007G160600 10.0kb upstream 10.0kb upstream 18951 true Chr07: 27141060-27160010 Phaseolus vulgaris
Phvul.007G160600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 27150011-27160010 Phaseolus vulgaris
Phvul.007G160600 10.0kb downstream 10.0kb downstream 18951 true Chr07: 27131060-27150010 Phaseolus vulgaris
Phvul.007G160600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 27131060-27141059 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311900 5265 Fabidae View MSA
124065604 5270 Rosid View MSA
123741487 5271 Pentapetalae View MSA
122792824 5272 Eudicot View MSA
122048354 5273 Angiosperm View MSA
121350822 5274 Embryophyte View MSA
123381897 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.01947 0.0 3.18431   Low
cufflinks 2.27364 0.0 6.50759    
cufflinks 1.71107 0.0 5.02875    
cufflinks 2.10253 0.0 6.13724    
cufflinks 1.06058 0.0 3.3425   Low
cufflinks 2.15142 0.0 6.184    
cufflinks 1.75887 0.0 5.18218    
cufflinks 2.90824 0.0 8.08999   High
cufflinks 1.69307 0.0 5.0311    
cufflinks 2.42967 0.0 6.91107    
cufflinks 0.792639 0.0 2.57441   Low

0 Strain