Gene : Phvul.005G016000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR14155//PTHR14155:SF159 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Genomic Order:  155
Name:  ? Phvul.005G016000 Secondary Identifier:  ? PAC:37153246
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G016000 0.5kb upstream 0.5kb upstream 2964 true Chr05: 1400762-1403725 Phaseolus vulgaris
Phvul.005G016000 0.5kb upstream 0.5kb upstream 500 false Chr05: 1403226-1403725 Phaseolus vulgaris
Phvul.005G016000 0.5kb downstream 0.5kb downstream 2964 true Chr05: 1400262-1403225 Phaseolus vulgaris
Phvul.005G016000 0.5kb downstream 0.5kb downstream 500 false Chr05: 1400262-1400761 Phaseolus vulgaris
Phvul.005G016000 1.0kb upstream 1.0kb upstream 3464 true Chr05: 1400762-1404225 Phaseolus vulgaris
Phvul.005G016000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1403226-1404225 Phaseolus vulgaris
Phvul.005G016000 1.0kb downstream 1.0kb downstream 3464 true Chr05: 1399762-1403225 Phaseolus vulgaris
Phvul.005G016000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1399762-1400761 Phaseolus vulgaris
Phvul.005G016000 2.0kb upstream 2.0kb upstream 4464 true Chr05: 1400762-1405225 Phaseolus vulgaris
Phvul.005G016000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1403226-1405225 Phaseolus vulgaris
Phvul.005G016000 2.0kb downstream 2.0kb downstream 4464 true Chr05: 1398762-1403225 Phaseolus vulgaris
Phvul.005G016000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1398762-1400761 Phaseolus vulgaris
Phvul.005G016000 5.0kb upstream 5.0kb upstream 7464 true Chr05: 1400762-1408225 Phaseolus vulgaris
Phvul.005G016000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1403226-1408225 Phaseolus vulgaris
Phvul.005G016000 5.0kb downstream 5.0kb downstream 7464 true Chr05: 1395762-1403225 Phaseolus vulgaris
Phvul.005G016000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1395762-1400761 Phaseolus vulgaris
Phvul.005G016000 10.0kb upstream 10.0kb upstream 12464 true Chr05: 1400762-1413225 Phaseolus vulgaris
Phvul.005G016000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1403226-1413225 Phaseolus vulgaris
Phvul.005G016000 10.0kb downstream 10.0kb downstream 12464 true Chr05: 1390762-1403225 Phaseolus vulgaris
Phvul.005G016000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1390762-1400761 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254560 5265 Fabidae View MSA
124072575 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.6737 0.0 86.6616    
cufflinks 23.8631 0.0 82.512    
cufflinks 18.3231 0.0 68.0346    
cufflinks 56.6917 0.0 194.303 High High
cufflinks 38.8525 0.0 128.545 High  
cufflinks 18.8842 0.0 69.048    
cufflinks 8.65142 0.0 32.183   Low
cufflinks 4.45153 0.0 20.3065   Low
cufflinks 13.0276 0.0 51.2243    
cufflinks 27.3615 0.0 93.8943    
cufflinks 43.4905 0.0 128.193 High High

0 Strain