Gene : Phvul.007G162900 P. vulgaris v2.1
Defline:  (1 of 2) K02930 - large subunit ribosomal protein L4e (RP-L4e, RPL4) Genomic Order:  1486
Name:  ? Phvul.007G162900 Secondary Identifier:  ? PAC:37164392
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G162900 0.5kb upstream 0.5kb upstream 2901 true Chr07: 27560385-27563285 Phaseolus vulgaris
Phvul.007G162900 0.5kb upstream 0.5kb upstream 500 false Chr07: 27562786-27563285 Phaseolus vulgaris
Phvul.007G162900 0.5kb downstream 0.5kb downstream 2901 true Chr07: 27559885-27562785 Phaseolus vulgaris
Phvul.007G162900 0.5kb downstream 0.5kb downstream 500 false Chr07: 27559885-27560384 Phaseolus vulgaris
Phvul.007G162900 1.0kb upstream 1.0kb upstream 3401 true Chr07: 27560385-27563785 Phaseolus vulgaris
Phvul.007G162900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 27562786-27563785 Phaseolus vulgaris
Phvul.007G162900 1.0kb downstream 1.0kb downstream 3401 true Chr07: 27559385-27562785 Phaseolus vulgaris
Phvul.007G162900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 27559385-27560384 Phaseolus vulgaris
Phvul.007G162900 2.0kb upstream 2.0kb upstream 4401 true Chr07: 27560385-27564785 Phaseolus vulgaris
Phvul.007G162900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 27562786-27564785 Phaseolus vulgaris
Phvul.007G162900 2.0kb downstream 2.0kb downstream 4401 true Chr07: 27558385-27562785 Phaseolus vulgaris
Phvul.007G162900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 27558385-27560384 Phaseolus vulgaris
Phvul.007G162900 5.0kb upstream 5.0kb upstream 7401 true Chr07: 27560385-27567785 Phaseolus vulgaris
Phvul.007G162900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 27562786-27567785 Phaseolus vulgaris
Phvul.007G162900 5.0kb downstream 5.0kb downstream 7401 true Chr07: 27555385-27562785 Phaseolus vulgaris
Phvul.007G162900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 27555385-27560384 Phaseolus vulgaris
Phvul.007G162900 10.0kb upstream 10.0kb upstream 12401 true Chr07: 27560385-27572785 Phaseolus vulgaris
Phvul.007G162900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 27562786-27572785 Phaseolus vulgaris
Phvul.007G162900 10.0kb downstream 10.0kb downstream 12401 true Chr07: 27550385-27562785 Phaseolus vulgaris
Phvul.007G162900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 27550385-27560384 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311501 5265 Fabidae View MSA
124063990 5270 Rosid View MSA
123739316 5271 Pentapetalae View MSA
122788989 5272 Eudicot View MSA
122046079 5273 Angiosperm View MSA
121350172 5274 Embryophyte View MSA
123424794 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 159.791 0.0 471.16 High Low
cufflinks 341.831 0.0 1142.87 High High
cufflinks 159.623 0.0 469.001 High Low
cufflinks 278.16 0.0 909.585 High  
cufflinks 270.584 0.0 884.498 High  
cufflinks 188.492 0.0 566.589 High  
cufflinks 160.407 0.0 478.104 High Low
cufflinks 191.645 0.0 579.657 High  
cufflinks 274.488 0.0 892.119 High  
cufflinks 170.831 0.0 506.881 High  
cufflinks 245.3 0.0 781.654 High  

0 Strain