Gene : Phvul.005G019100 P. vulgaris v2.1
Defline:  (1 of 2) K10732 - GINS complex subunit 1 (GINS1, PSF1) Genomic Order:  187
Name:  ? Phvul.005G019100 Secondary Identifier:  ? PAC:37152594
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G019100 0.5kb upstream 0.5kb upstream 5012 true Chr05: 1671485-1676496 Phaseolus vulgaris
Phvul.005G019100 0.5kb upstream 0.5kb upstream 500 false Chr05: 1675997-1676496 Phaseolus vulgaris
Phvul.005G019100 0.5kb downstream 0.5kb downstream 5012 true Chr05: 1670985-1675996 Phaseolus vulgaris
Phvul.005G019100 0.5kb downstream 0.5kb downstream 500 false Chr05: 1670985-1671484 Phaseolus vulgaris
Phvul.005G019100 1.0kb upstream 1.0kb upstream 5512 true Chr05: 1671485-1676996 Phaseolus vulgaris
Phvul.005G019100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1675997-1676996 Phaseolus vulgaris
Phvul.005G019100 1.0kb downstream 1.0kb downstream 5512 true Chr05: 1670485-1675996 Phaseolus vulgaris
Phvul.005G019100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1670485-1671484 Phaseolus vulgaris
Phvul.005G019100 2.0kb upstream 2.0kb upstream 6512 true Chr05: 1671485-1677996 Phaseolus vulgaris
Phvul.005G019100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1675997-1677996 Phaseolus vulgaris
Phvul.005G019100 2.0kb downstream 2.0kb downstream 6512 true Chr05: 1669485-1675996 Phaseolus vulgaris
Phvul.005G019100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1669485-1671484 Phaseolus vulgaris
Phvul.005G019100 5.0kb upstream 5.0kb upstream 9512 true Chr05: 1671485-1680996 Phaseolus vulgaris
Phvul.005G019100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1675997-1680996 Phaseolus vulgaris
Phvul.005G019100 5.0kb downstream 5.0kb downstream 9512 true Chr05: 1666485-1675996 Phaseolus vulgaris
Phvul.005G019100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1666485-1671484 Phaseolus vulgaris
Phvul.005G019100 10.0kb upstream 10.0kb upstream 14512 true Chr05: 1671485-1685996 Phaseolus vulgaris
Phvul.005G019100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1675997-1685996 Phaseolus vulgaris
Phvul.005G019100 10.0kb downstream 10.0kb downstream 14512 true Chr05: 1661485-1675996 Phaseolus vulgaris
Phvul.005G019100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1661485-1671484 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308679 5265 Fabidae View MSA
124065475 5270 Rosid View MSA
123736911 5271 Pentapetalae View MSA
122793813 5272 Eudicot View MSA
122045601 5273 Angiosperm View MSA
121344655 5274 Embryophyte View MSA
123424278 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.6492 0.0 12.1311    
cufflinks 4.14923 0.0 13.5521   High
cufflinks 3.83327 0.0 12.5928   High
cufflinks 3.02323 0.0 10.3265    
cufflinks 1.62582 0.0 5.92732   Low
cufflinks 3.5208 0.0 11.7045    
cufflinks 2.99357 0.0 10.1374    
cufflinks 2.4062 0.0 8.3114    
cufflinks 2.08934 0.0 7.37053    
cufflinks 1.95875 0.0 6.97306   Low
cufflinks 2.99085 0.0 10.215    

0 Strain