Gene : Phvul.005G017100 P. vulgaris v2.1
Genomic Order:  167 Name:  ? Phvul.005G017100
Secondary Identifier:  ? PAC:37153332
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G017100 0.5kb upstream 0.5kb upstream 1475 true Chr05: 1493992-1495466 Phaseolus vulgaris
Phvul.005G017100 0.5kb upstream 0.5kb upstream 500 false Chr05: 1494967-1495466 Phaseolus vulgaris
Phvul.005G017100 0.5kb downstream 0.5kb downstream 1475 true Chr05: 1493492-1494966 Phaseolus vulgaris
Phvul.005G017100 0.5kb downstream 0.5kb downstream 500 false Chr05: 1493492-1493991 Phaseolus vulgaris
Phvul.005G017100 1.0kb upstream 1.0kb upstream 1975 true Chr05: 1493992-1495966 Phaseolus vulgaris
Phvul.005G017100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1494967-1495966 Phaseolus vulgaris
Phvul.005G017100 1.0kb downstream 1.0kb downstream 1975 true Chr05: 1492992-1494966 Phaseolus vulgaris
Phvul.005G017100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1492992-1493991 Phaseolus vulgaris
Phvul.005G017100 2.0kb upstream 2.0kb upstream 2975 true Chr05: 1493992-1496966 Phaseolus vulgaris
Phvul.005G017100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1494967-1496966 Phaseolus vulgaris
Phvul.005G017100 2.0kb downstream 2.0kb downstream 2975 true Chr05: 1491992-1494966 Phaseolus vulgaris
Phvul.005G017100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1491992-1493991 Phaseolus vulgaris
Phvul.005G017100 5.0kb upstream 5.0kb upstream 5975 true Chr05: 1493992-1499966 Phaseolus vulgaris
Phvul.005G017100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1494967-1499966 Phaseolus vulgaris
Phvul.005G017100 5.0kb downstream 5.0kb downstream 5975 true Chr05: 1488992-1494966 Phaseolus vulgaris
Phvul.005G017100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1488992-1493991 Phaseolus vulgaris
Phvul.005G017100 10.0kb upstream 10.0kb upstream 10975 true Chr05: 1493992-1504966 Phaseolus vulgaris
Phvul.005G017100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1494967-1504966 Phaseolus vulgaris
Phvul.005G017100 10.0kb downstream 10.0kb downstream 10975 true Chr05: 1483992-1494966 Phaseolus vulgaris
Phvul.005G017100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1483992-1493991 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041322 5273 Angiosperm View MSA
122309608 5265 Fabidae View MSA
124060832 5270 Rosid View MSA
123739954 5271 Pentapetalae View MSA
122795331 5272 Eudicot View MSA
121309829 5274 Embryophyte View MSA
123347480 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.70442 0.0 8.52689    
cufflinks 13.9557 0.0 37.2657   High
cufflinks 1.23908 0.0 4.32181   Low
cufflinks 2.03061 0.0 6.58284    
cufflinks 10.1088 0.0 27.7578    
cufflinks 7.87128 0.0 22.1148    
cufflinks 7.39965 0.0 20.6239    
cufflinks 4.08385 0.0 12.2515    
cufflinks 13.6041 0.0 36.1134    
cufflinks 0.281921 0.0 1.1072 Low Low
cufflinks 7.73713 0.0 21.5474    

0 Strain