Gene : Phvul.005G018200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR15321 - TUMOR SUPPRESSOR P53-BINDING PROTEIN 1 Genomic Order:  178
Name:  ? Phvul.005G018200 Secondary Identifier:  ? PAC:37152713
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G018200 0.5kb upstream 0.5kb upstream 11232 true Chr05: 1559001-1570232 Phaseolus vulgaris
Phvul.005G018200 0.5kb upstream 0.5kb upstream 500 false Chr05: 1569733-1570232 Phaseolus vulgaris
Phvul.005G018200 0.5kb downstream 0.5kb downstream 11232 true Chr05: 1558501-1569732 Phaseolus vulgaris
Phvul.005G018200 0.5kb downstream 0.5kb downstream 500 false Chr05: 1558501-1559000 Phaseolus vulgaris
Phvul.005G018200 1.0kb upstream 1.0kb upstream 11732 true Chr05: 1559001-1570732 Phaseolus vulgaris
Phvul.005G018200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1569733-1570732 Phaseolus vulgaris
Phvul.005G018200 1.0kb downstream 1.0kb downstream 11732 true Chr05: 1558001-1569732 Phaseolus vulgaris
Phvul.005G018200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1558001-1559000 Phaseolus vulgaris
Phvul.005G018200 2.0kb upstream 2.0kb upstream 12732 true Chr05: 1559001-1571732 Phaseolus vulgaris
Phvul.005G018200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1569733-1571732 Phaseolus vulgaris
Phvul.005G018200 2.0kb downstream 2.0kb downstream 12732 true Chr05: 1557001-1569732 Phaseolus vulgaris
Phvul.005G018200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1557001-1559000 Phaseolus vulgaris
Phvul.005G018200 5.0kb upstream 5.0kb upstream 15732 true Chr05: 1559001-1574732 Phaseolus vulgaris
Phvul.005G018200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1569733-1574732 Phaseolus vulgaris
Phvul.005G018200 5.0kb downstream 5.0kb downstream 15732 true Chr05: 1554001-1569732 Phaseolus vulgaris
Phvul.005G018200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1554001-1559000 Phaseolus vulgaris
Phvul.005G018200 10.0kb upstream 10.0kb upstream 20732 true Chr05: 1559001-1579732 Phaseolus vulgaris
Phvul.005G018200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1569733-1579732 Phaseolus vulgaris
Phvul.005G018200 10.0kb downstream 10.0kb downstream 20732 true Chr05: 1549001-1569732 Phaseolus vulgaris
Phvul.005G018200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1549001-1559000 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306583 5265 Fabidae View MSA
124050896 5270 Rosid View MSA
123750519 5271 Pentapetalae View MSA
122797357 5272 Eudicot View MSA
122048777 5273 Angiosperm View MSA
121349208 5274 Embryophyte View MSA
123381216 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.310678 0.0 1.13502 Low Low
cufflinks 0.617355 0.0 2.10794    
cufflinks 0.990869 0.0 3.18952    
cufflinks 0.41278 0.0 1.48335 Low  
cufflinks 0.535102 0.0 1.87644 Low  
cufflinks 0.956235 0.0 3.10375    
cufflinks 1.62228 0.0 4.97349   High
cufflinks 1.5354 0.0 4.69708   High
cufflinks 2.15631 0.0 6.41693   High
cufflinks 0.333539 0.0 1.21273   Low
cufflinks 0.451462 0.0 1.60606 Low  

0 Strain