Gene : Phvul.007G165100 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11064:SF42 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-5 Genomic Order:  1509
Name:  ? Phvul.007G165100 Secondary Identifier:  ? PAC:37165085
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G165100 0.5kb upstream 0.5kb upstream 956 true Chr07: 27830959-27831914 Phaseolus vulgaris
Phvul.007G165100 0.5kb upstream 0.5kb upstream 500 false Chr07: 27831415-27831914 Phaseolus vulgaris
Phvul.007G165100 0.5kb downstream 0.5kb downstream 956 true Chr07: 27830459-27831414 Phaseolus vulgaris
Phvul.007G165100 0.5kb downstream 0.5kb downstream 500 false Chr07: 27830459-27830958 Phaseolus vulgaris
Phvul.007G165100 1.0kb upstream 1.0kb upstream 1456 true Chr07: 27830959-27832414 Phaseolus vulgaris
Phvul.007G165100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 27831415-27832414 Phaseolus vulgaris
Phvul.007G165100 1.0kb downstream 1.0kb downstream 1456 true Chr07: 27829959-27831414 Phaseolus vulgaris
Phvul.007G165100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 27829959-27830958 Phaseolus vulgaris
Phvul.007G165100 2.0kb upstream 2.0kb upstream 2456 true Chr07: 27830959-27833414 Phaseolus vulgaris
Phvul.007G165100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 27831415-27833414 Phaseolus vulgaris
Phvul.007G165100 2.0kb downstream 2.0kb downstream 2456 true Chr07: 27828959-27831414 Phaseolus vulgaris
Phvul.007G165100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 27828959-27830958 Phaseolus vulgaris
Phvul.007G165100 5.0kb upstream 5.0kb upstream 5456 true Chr07: 27830959-27836414 Phaseolus vulgaris
Phvul.007G165100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 27831415-27836414 Phaseolus vulgaris
Phvul.007G165100 5.0kb downstream 5.0kb downstream 5456 true Chr07: 27825959-27831414 Phaseolus vulgaris
Phvul.007G165100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 27825959-27830958 Phaseolus vulgaris
Phvul.007G165100 10.0kb upstream 10.0kb upstream 10456 true Chr07: 27830959-27841414 Phaseolus vulgaris
Phvul.007G165100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 27831415-27841414 Phaseolus vulgaris
Phvul.007G165100 10.0kb downstream 10.0kb downstream 10456 true Chr07: 27820959-27831414 Phaseolus vulgaris
Phvul.007G165100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 27820959-27830958 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041139 5273 Angiosperm View MSA
122312390 5265 Fabidae View MSA
124070521 5270 Rosid View MSA
123747842 5271 Pentapetalae View MSA
122796503 5272 Eudicot View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.209513 0.0 0.973219 Low Low
cufflinks 0.425381 0.0 1.86311 Low  
cufflinks 1.05814 0.0 4.24782    
cufflinks 8.19307 0.0 27.3182   High
cufflinks 9.12748 0.0 30.1136   High
cufflinks 1.77396 0.0 6.82215    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.93248 0.0 7.42275    

0 Strain