Gene : Phvul.007G165600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32370:SF30 - BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 Genomic Order:  1518
Name:  ? Phvul.007G165600 Secondary Identifier:  ? PAC:37166668
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G165600 0.5kb upstream 0.5kb upstream 5169 true Chr07: 27988962-27994130 Phaseolus vulgaris
Phvul.007G165600 0.5kb upstream 0.5kb upstream 500 false Chr07: 27988962-27989461 Phaseolus vulgaris
Phvul.007G165600 0.5kb downstream 0.5kb downstream 5169 true Chr07: 27989462-27994630 Phaseolus vulgaris
Phvul.007G165600 0.5kb downstream 0.5kb downstream 500 false Chr07: 27994131-27994630 Phaseolus vulgaris
Phvul.007G165600 1.0kb upstream 1.0kb upstream 5669 true Chr07: 27988462-27994130 Phaseolus vulgaris
Phvul.007G165600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 27988462-27989461 Phaseolus vulgaris
Phvul.007G165600 1.0kb downstream 1.0kb downstream 5669 true Chr07: 27989462-27995130 Phaseolus vulgaris
Phvul.007G165600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 27994131-27995130 Phaseolus vulgaris
Phvul.007G165600 2.0kb upstream 2.0kb upstream 6669 true Chr07: 27987462-27994130 Phaseolus vulgaris
Phvul.007G165600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 27987462-27989461 Phaseolus vulgaris
Phvul.007G165600 2.0kb downstream 2.0kb downstream 6669 true Chr07: 27989462-27996130 Phaseolus vulgaris
Phvul.007G165600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 27994131-27996130 Phaseolus vulgaris
Phvul.007G165600 5.0kb upstream 5.0kb upstream 9669 true Chr07: 27984462-27994130 Phaseolus vulgaris
Phvul.007G165600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 27984462-27989461 Phaseolus vulgaris
Phvul.007G165600 5.0kb downstream 5.0kb downstream 9669 true Chr07: 27989462-27999130 Phaseolus vulgaris
Phvul.007G165600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 27994131-27999130 Phaseolus vulgaris
Phvul.007G165600 10.0kb upstream 10.0kb upstream 14669 true Chr07: 27979462-27994130 Phaseolus vulgaris
Phvul.007G165600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 27979462-27989461 Phaseolus vulgaris
Phvul.007G165600 10.0kb downstream 10.0kb downstream 14669 true Chr07: 27989462-28004130 Phaseolus vulgaris
Phvul.007G165600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 27994131-28004130 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308207 5265 Fabidae View MSA
124062194 5270 Rosid View MSA
123742261 5271 Pentapetalae View MSA
122789969 5272 Eudicot View MSA
122042362 5273 Angiosperm View MSA
121350656 5274 Embryophyte View MSA
123381839 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.792981 0.0 4.49178   Low
cufflinks 3.20783 0.0 11.6871    
cufflinks 1.63982 0.0 7.18666    
cufflinks 0.844047 0.0 3.48413   Low
cufflinks 4.727 0.0 15.9185    
cufflinks 1.85767 0.0 9.17184    
cufflinks 4.97778 0.0 19.0576    
cufflinks 1.29202 0.0 5.85936    
cufflinks 6.37263 0.0 23.7788   High
cufflinks 0.929632 0.0 5.78186   Low
cufflinks 5.70303 0.0 23.2667   High

0 Strain