Gene : Phvul.005G021900 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11206:SF156 - MATE EFFLUX FAMILY PROTEIN FRD3 Genomic Order:  216
Name:  ? Phvul.005G021900 Secondary Identifier:  ? PAC:37152505
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G021900 0.5kb upstream 0.5kb upstream 9264 true Chr05: 1952723-1961986 Phaseolus vulgaris
Phvul.005G021900 0.5kb upstream 0.5kb upstream 500 false Chr05: 1952723-1953222 Phaseolus vulgaris
Phvul.005G021900 0.5kb downstream 0.5kb downstream 9264 true Chr05: 1953223-1962486 Phaseolus vulgaris
Phvul.005G021900 0.5kb downstream 0.5kb downstream 500 false Chr05: 1961987-1962486 Phaseolus vulgaris
Phvul.005G021900 1.0kb upstream 1.0kb upstream 9764 true Chr05: 1952223-1961986 Phaseolus vulgaris
Phvul.005G021900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1952223-1953222 Phaseolus vulgaris
Phvul.005G021900 1.0kb downstream 1.0kb downstream 9764 true Chr05: 1953223-1962986 Phaseolus vulgaris
Phvul.005G021900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1961987-1962986 Phaseolus vulgaris
Phvul.005G021900 2.0kb upstream 2.0kb upstream 10764 true Chr05: 1951223-1961986 Phaseolus vulgaris
Phvul.005G021900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1951223-1953222 Phaseolus vulgaris
Phvul.005G021900 2.0kb downstream 2.0kb downstream 10764 true Chr05: 1953223-1963986 Phaseolus vulgaris
Phvul.005G021900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1961987-1963986 Phaseolus vulgaris
Phvul.005G021900 5.0kb upstream 5.0kb upstream 13764 true Chr05: 1948223-1961986 Phaseolus vulgaris
Phvul.005G021900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1948223-1953222 Phaseolus vulgaris
Phvul.005G021900 5.0kb downstream 5.0kb downstream 13764 true Chr05: 1953223-1966986 Phaseolus vulgaris
Phvul.005G021900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1961987-1966986 Phaseolus vulgaris
Phvul.005G021900 10.0kb upstream 10.0kb upstream 18764 true Chr05: 1943223-1961986 Phaseolus vulgaris
Phvul.005G021900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1943223-1953222 Phaseolus vulgaris
Phvul.005G021900 10.0kb downstream 10.0kb downstream 18764 true Chr05: 1953223-1971986 Phaseolus vulgaris
Phvul.005G021900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1961987-1971986 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313903 5265 Fabidae View MSA
124072116 5270 Rosid View MSA
123753087 5271 Pentapetalae View MSA
122795715 5272 Eudicot View MSA
122045174 5273 Angiosperm View MSA
121348626 5274 Embryophyte View MSA
123428603 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.53187 0.0 4.98967    
cufflinks 4.0559 0.0 11.8084    
cufflinks 0.0295098 0.0 0.137832 Low Low
cufflinks 0.242862 0.0 0.948531 Low  
cufflinks 4.01642 0.0 11.7573    
cufflinks 0.0678361 0.0 0.292707 Low Low
cufflinks 42.8292 0.0 112.175 High High
cufflinks 7.38892 0.0 20.2948    
cufflinks 29.2264 0.0 75.6122   High
cufflinks 0.0367158 0.0 0.168374 Low Low
cufflinks 28.4609 0.0 73.6034   High

0 Strain