Gene : Phvul.007G166500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22939:SF83 - PROTEASE DO-LIKE 2, CHLOROPLASTIC Genomic Order:  1527
Name:  ? Phvul.007G166500 Secondary Identifier:  ? PAC:37164220
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G166500 0.5kb upstream 0.5kb upstream 12034 true Chr07: 28188133-28200166 Phaseolus vulgaris
Phvul.007G166500 0.5kb upstream 0.5kb upstream 500 false Chr07: 28199667-28200166 Phaseolus vulgaris
Phvul.007G166500 0.5kb downstream 0.5kb downstream 12034 true Chr07: 28187633-28199666 Phaseolus vulgaris
Phvul.007G166500 0.5kb downstream 0.5kb downstream 500 false Chr07: 28187633-28188132 Phaseolus vulgaris
Phvul.007G166500 1.0kb upstream 1.0kb upstream 12534 true Chr07: 28188133-28200666 Phaseolus vulgaris
Phvul.007G166500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 28199667-28200666 Phaseolus vulgaris
Phvul.007G166500 1.0kb downstream 1.0kb downstream 12534 true Chr07: 28187133-28199666 Phaseolus vulgaris
Phvul.007G166500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 28187133-28188132 Phaseolus vulgaris
Phvul.007G166500 2.0kb upstream 2.0kb upstream 13534 true Chr07: 28188133-28201666 Phaseolus vulgaris
Phvul.007G166500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 28199667-28201666 Phaseolus vulgaris
Phvul.007G166500 2.0kb downstream 2.0kb downstream 13534 true Chr07: 28186133-28199666 Phaseolus vulgaris
Phvul.007G166500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 28186133-28188132 Phaseolus vulgaris
Phvul.007G166500 5.0kb upstream 5.0kb upstream 16534 true Chr07: 28188133-28204666 Phaseolus vulgaris
Phvul.007G166500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 28199667-28204666 Phaseolus vulgaris
Phvul.007G166500 5.0kb downstream 5.0kb downstream 16534 true Chr07: 28183133-28199666 Phaseolus vulgaris
Phvul.007G166500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 28183133-28188132 Phaseolus vulgaris
Phvul.007G166500 10.0kb upstream 10.0kb upstream 21534 true Chr07: 28188133-28209666 Phaseolus vulgaris
Phvul.007G166500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 28199667-28209666 Phaseolus vulgaris
Phvul.007G166500 10.0kb downstream 10.0kb downstream 21534 true Chr07: 28178133-28199666 Phaseolus vulgaris
Phvul.007G166500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 28178133-28188132 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304511 5265 Fabidae View MSA
124069438 5270 Rosid View MSA
123746300 5271 Pentapetalae View MSA
122793106 5272 Eudicot View MSA
122044524 5273 Angiosperm View MSA
123429293 5275 Viridiplantae View MSA
121310306 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.28117 0.0 22.3002    
cufflinks 8.79699 0.0 33.6394    
cufflinks 24.3645 0.0 102.29   High
cufflinks 4.90379 0.0 18.8019    
cufflinks 4.14669 0.0 20.5477    
cufflinks 19.3702 0.0 73.0749   High
cufflinks 1.85922 0.0 6.06415   Low
cufflinks 1.89276 0.0 7.7802   Low
cufflinks 1.44803 0.0 6.38994   Low
cufflinks 5.42884 0.0 20.0664    
cufflinks 3.09895 0.0 11.3366    

0 Strain