Gene : Phvul.005G022800 P. vulgaris v2.1
Defline:  (1 of 2) K16615 - actin-related protein 7, plant (PARP7) Genomic Order:  225
Name:  ? Phvul.005G022800 Secondary Identifier:  ? PAC:37154025
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G022800 0.5kb upstream 0.5kb upstream 5881 true Chr05: 2036640-2042520 Phaseolus vulgaris
Phvul.005G022800 0.5kb upstream 0.5kb upstream 500 false Chr05: 2042021-2042520 Phaseolus vulgaris
Phvul.005G022800 0.5kb downstream 0.5kb downstream 5881 true Chr05: 2036140-2042020 Phaseolus vulgaris
Phvul.005G022800 0.5kb downstream 0.5kb downstream 500 false Chr05: 2036140-2036639 Phaseolus vulgaris
Phvul.005G022800 1.0kb upstream 1.0kb upstream 6381 true Chr05: 2036640-2043020 Phaseolus vulgaris
Phvul.005G022800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2042021-2043020 Phaseolus vulgaris
Phvul.005G022800 1.0kb downstream 1.0kb downstream 6381 true Chr05: 2035640-2042020 Phaseolus vulgaris
Phvul.005G022800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2035640-2036639 Phaseolus vulgaris
Phvul.005G022800 2.0kb upstream 2.0kb upstream 7381 true Chr05: 2036640-2044020 Phaseolus vulgaris
Phvul.005G022800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2042021-2044020 Phaseolus vulgaris
Phvul.005G022800 2.0kb downstream 2.0kb downstream 7381 true Chr05: 2034640-2042020 Phaseolus vulgaris
Phvul.005G022800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2034640-2036639 Phaseolus vulgaris
Phvul.005G022800 5.0kb upstream 5.0kb upstream 10381 true Chr05: 2036640-2047020 Phaseolus vulgaris
Phvul.005G022800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2042021-2047020 Phaseolus vulgaris
Phvul.005G022800 5.0kb downstream 5.0kb downstream 10381 true Chr05: 2031640-2042020 Phaseolus vulgaris
Phvul.005G022800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2031640-2036639 Phaseolus vulgaris
Phvul.005G022800 10.0kb upstream 10.0kb upstream 15381 true Chr05: 2036640-2052020 Phaseolus vulgaris
Phvul.005G022800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2042021-2052020 Phaseolus vulgaris
Phvul.005G022800 10.0kb downstream 10.0kb downstream 15381 true Chr05: 2026640-2042020 Phaseolus vulgaris
Phvul.005G022800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2026640-2036639 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314401 5265 Fabidae View MSA
124067353 5270 Rosid View MSA
123740879 5271 Pentapetalae View MSA
122792002 5272 Eudicot View MSA
122047685 5273 Angiosperm View MSA
121343857 5274 Embryophyte View MSA
123428641 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.29149 0.0 23.2253    
cufflinks 10.9992 0.0 30.1135    
cufflinks 7.09436 0.0 20.1655    
cufflinks 9.27068 0.0 25.8855    
cufflinks 9.13555 0.0 25.4764    
cufflinks 11.7367 0.0 31.9605    
cufflinks 10.3801 0.0 28.6162    
cufflinks 10.1473 0.0 27.9148    
cufflinks 12.4701 0.0 33.9026   High
cufflinks 4.55037 0.0 13.5933   Low
cufflinks 10.513 0.0 28.9886    

0 Strain