Gene : Phvul.007G153100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23083:SF397 - UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SPINDLY-RELATED Genomic Order:  1393
Name:  ? Phvul.007G153100 Secondary Identifier:  ? PAC:37164927
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7437 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G153100 0.5kb upstream 0.5kb upstream 32397 true Chr07: 25894442-25926838 Phaseolus vulgaris
Phvul.007G153100 0.5kb upstream 0.5kb upstream 500 false Chr07: 25926339-25926838 Phaseolus vulgaris
Phvul.007G153100 0.5kb downstream 0.5kb downstream 32397 true Chr07: 25893942-25926338 Phaseolus vulgaris
Phvul.007G153100 0.5kb downstream 0.5kb downstream 500 false Chr07: 25893942-25894441 Phaseolus vulgaris
Phvul.007G153100 1.0kb upstream 1.0kb upstream 32897 true Chr07: 25894442-25927338 Phaseolus vulgaris
Phvul.007G153100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 25926339-25927338 Phaseolus vulgaris
Phvul.007G153100 1.0kb downstream 1.0kb downstream 32897 true Chr07: 25893442-25926338 Phaseolus vulgaris
Phvul.007G153100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 25893442-25894441 Phaseolus vulgaris
Phvul.007G153100 2.0kb upstream 2.0kb upstream 33897 true Chr07: 25894442-25928338 Phaseolus vulgaris
Phvul.007G153100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 25926339-25928338 Phaseolus vulgaris
Phvul.007G153100 2.0kb downstream 2.0kb downstream 33897 true Chr07: 25892442-25926338 Phaseolus vulgaris
Phvul.007G153100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 25892442-25894441 Phaseolus vulgaris
Phvul.007G153100 5.0kb upstream 5.0kb upstream 36897 true Chr07: 25894442-25931338 Phaseolus vulgaris
Phvul.007G153100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 25926339-25931338 Phaseolus vulgaris
Phvul.007G153100 5.0kb downstream 5.0kb downstream 36897 true Chr07: 25889442-25926338 Phaseolus vulgaris
Phvul.007G153100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 25889442-25894441 Phaseolus vulgaris
Phvul.007G153100 10.0kb upstream 10.0kb upstream 41897 true Chr07: 25894442-25936338 Phaseolus vulgaris
Phvul.007G153100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 25926339-25936338 Phaseolus vulgaris
Phvul.007G153100 10.0kb downstream 10.0kb downstream 41897 true Chr07: 25884442-25926338 Phaseolus vulgaris
Phvul.007G153100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 25884442-25894441 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303349 5265 Fabidae View MSA
124065064 5270 Rosid View MSA
123739134 5271 Pentapetalae View MSA
122791595 5272 Eudicot View MSA
122044417 5273 Angiosperm View MSA
121347707 5274 Embryophyte View MSA
123428836 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.76478 0.0 27.9167   Low
cufflinks 15.4898 0.0 62.5911    
cufflinks 11.6672 0.0 45.0012    
cufflinks 8.75 0.0 34.3248   Low
cufflinks 12.7018 0.0 44.8737    
cufflinks 14.2596 0.0 60.5407    
cufflinks 14.2687 0.0 55.4201    
cufflinks 12.7652 0.0 49.5418    
cufflinks 15.2663 0.0 59.3336    
cufflinks 20.7694 0.0 83.2693   High
cufflinks 10.4441 0.0 41.1892    

0 Strain