Gene : Phvul.007G153200 P. vulgaris v2.1
Defline:  (1 of 1) K17917 - sorting nexin-1/2 (SNX1_2) Genomic Order:  1394
Name:  ? Phvul.007G153200 Secondary Identifier:  ? PAC:37166944
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G153200 0.5kb upstream 0.5kb upstream 6173 true Chr07: 25936242-25942414 Phaseolus vulgaris
Phvul.007G153200 0.5kb upstream 0.5kb upstream 500 false Chr07: 25941915-25942414 Phaseolus vulgaris
Phvul.007G153200 0.5kb downstream 0.5kb downstream 6173 true Chr07: 25935742-25941914 Phaseolus vulgaris
Phvul.007G153200 0.5kb downstream 0.5kb downstream 500 false Chr07: 25935742-25936241 Phaseolus vulgaris
Phvul.007G153200 1.0kb upstream 1.0kb upstream 6673 true Chr07: 25936242-25942914 Phaseolus vulgaris
Phvul.007G153200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 25941915-25942914 Phaseolus vulgaris
Phvul.007G153200 1.0kb downstream 1.0kb downstream 6673 true Chr07: 25935242-25941914 Phaseolus vulgaris
Phvul.007G153200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 25935242-25936241 Phaseolus vulgaris
Phvul.007G153200 2.0kb upstream 2.0kb upstream 7673 true Chr07: 25936242-25943914 Phaseolus vulgaris
Phvul.007G153200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 25941915-25943914 Phaseolus vulgaris
Phvul.007G153200 2.0kb downstream 2.0kb downstream 7673 true Chr07: 25934242-25941914 Phaseolus vulgaris
Phvul.007G153200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 25934242-25936241 Phaseolus vulgaris
Phvul.007G153200 5.0kb upstream 5.0kb upstream 10673 true Chr07: 25936242-25946914 Phaseolus vulgaris
Phvul.007G153200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 25941915-25946914 Phaseolus vulgaris
Phvul.007G153200 5.0kb downstream 5.0kb downstream 10673 true Chr07: 25931242-25941914 Phaseolus vulgaris
Phvul.007G153200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 25931242-25936241 Phaseolus vulgaris
Phvul.007G153200 10.0kb upstream 10.0kb upstream 15673 true Chr07: 25936242-25951914 Phaseolus vulgaris
Phvul.007G153200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 25941915-25951914 Phaseolus vulgaris
Phvul.007G153200 10.0kb downstream 10.0kb downstream 15673 true Chr07: 25926242-25941914 Phaseolus vulgaris
Phvul.007G153200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 25926242-25936241 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300611 5265 Fabidae View MSA
124066249 5270 Rosid View MSA
123741756 5271 Pentapetalae View MSA
122792565 5272 Eudicot View MSA
122045293 5273 Angiosperm View MSA
121345603 5274 Embryophyte View MSA
123428162 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.9736 0.0 67.1564   Low
cufflinks 27.6009 0.0 77.0682    
cufflinks 29.5337 0.0 82.3031    
cufflinks 30.7772 0.0 85.7659    
cufflinks 26.6491 0.0 74.197    
cufflinks 21.425 0.0 60.5357   Low
cufflinks 25.3789 0.0 70.8639    
cufflinks 36.0678 0.0 100.577 High High
cufflinks 34.0298 0.0 94.9271 High  
cufflinks 30.5116 0.0 85.2902    
cufflinks 35.3124 0.0 98.7441 High High

0 Strain