Gene : Phvul.007G152600 P. vulgaris v2.1
Defline:  (1 of 4) PTHR18952:SF100 - ALPHA CARBONIC ANHYDRASE 5 Genomic Order:  1388
Name:  ? Phvul.007G152600 Secondary Identifier:  ? PAC:37167642
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris CYANCAT-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-241 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7115 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7117 Phaseolus vulgaris pathologic  
Pvulgaris PWYQT-4429 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G152600 0.5kb upstream 0.5kb upstream 4590 true Chr07: 25800710-25805299 Phaseolus vulgaris
Phvul.007G152600 0.5kb upstream 0.5kb upstream 500 false Chr07: 25804800-25805299 Phaseolus vulgaris
Phvul.007G152600 0.5kb downstream 0.5kb downstream 4590 true Chr07: 25800210-25804799 Phaseolus vulgaris
Phvul.007G152600 0.5kb downstream 0.5kb downstream 500 false Chr07: 25800210-25800709 Phaseolus vulgaris
Phvul.007G152600 1.0kb upstream 1.0kb upstream 5090 true Chr07: 25800710-25805799 Phaseolus vulgaris
Phvul.007G152600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 25804800-25805799 Phaseolus vulgaris
Phvul.007G152600 1.0kb downstream 1.0kb downstream 5090 true Chr07: 25799710-25804799 Phaseolus vulgaris
Phvul.007G152600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 25799710-25800709 Phaseolus vulgaris
Phvul.007G152600 2.0kb upstream 2.0kb upstream 6090 true Chr07: 25800710-25806799 Phaseolus vulgaris
Phvul.007G152600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 25804800-25806799 Phaseolus vulgaris
Phvul.007G152600 2.0kb downstream 2.0kb downstream 6090 true Chr07: 25798710-25804799 Phaseolus vulgaris
Phvul.007G152600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 25798710-25800709 Phaseolus vulgaris
Phvul.007G152600 5.0kb upstream 5.0kb upstream 9090 true Chr07: 25800710-25809799 Phaseolus vulgaris
Phvul.007G152600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 25804800-25809799 Phaseolus vulgaris
Phvul.007G152600 5.0kb downstream 5.0kb downstream 9090 true Chr07: 25795710-25804799 Phaseolus vulgaris
Phvul.007G152600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 25795710-25800709 Phaseolus vulgaris
Phvul.007G152600 10.0kb upstream 10.0kb upstream 14090 true Chr07: 25800710-25814799 Phaseolus vulgaris
Phvul.007G152600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 25804800-25814799 Phaseolus vulgaris
Phvul.007G152600 10.0kb downstream 10.0kb downstream 14090 true Chr07: 25790710-25804799 Phaseolus vulgaris
Phvul.007G152600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 25790710-25800709 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301331 5265 Fabidae View MSA
124069270 5270 Rosid View MSA
123746291 5271 Pentapetalae View MSA
122797456 5272 Eudicot View MSA
122049694 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.2543 0.0 39.1319    
cufflinks 2.54635 0.0 8.3829   Low
cufflinks 66.1719 0.0 172.384 High High
cufflinks 6.86769 0.0 20.2582    
cufflinks 14.5783 0.0 40.1285    
cufflinks 18.0837 0.0 48.5364    
cufflinks 15.7859 0.0 42.8268    
cufflinks 14.1423 0.0 38.5598    
cufflinks 5.46752 0.0 16.5007    
cufflinks 3.56118 0.0 11.3139   Low
cufflinks 28.0167 0.0 73.3522    

0 Strain