Gene : Phvul.005G008400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31585:SF12 - FOLATE-BIOPTERIN TRANSPORTER 8, CHLOROPLASTIC-RELATED Genomic Order:  80
Name:  ? Phvul.005G008400 Secondary Identifier:  ? PAC:37154109
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G008400 0.5kb upstream 0.5kb upstream 4010 true Chr05: 739318-743327 Phaseolus vulgaris
Phvul.005G008400 0.5kb upstream 0.5kb upstream 500 false Chr05: 742828-743327 Phaseolus vulgaris
Phvul.005G008400 0.5kb downstream 0.5kb downstream 4010 true Chr05: 738818-742827 Phaseolus vulgaris
Phvul.005G008400 0.5kb downstream 0.5kb downstream 500 false Chr05: 738818-739317 Phaseolus vulgaris
Phvul.005G008400 1.0kb upstream 1.0kb upstream 4510 true Chr05: 739318-743827 Phaseolus vulgaris
Phvul.005G008400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 742828-743827 Phaseolus vulgaris
Phvul.005G008400 1.0kb downstream 1.0kb downstream 4510 true Chr05: 738318-742827 Phaseolus vulgaris
Phvul.005G008400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 738318-739317 Phaseolus vulgaris
Phvul.005G008400 2.0kb upstream 2.0kb upstream 5510 true Chr05: 739318-744827 Phaseolus vulgaris
Phvul.005G008400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 742828-744827 Phaseolus vulgaris
Phvul.005G008400 2.0kb downstream 2.0kb downstream 5510 true Chr05: 737318-742827 Phaseolus vulgaris
Phvul.005G008400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 737318-739317 Phaseolus vulgaris
Phvul.005G008400 5.0kb upstream 5.0kb upstream 8510 true Chr05: 739318-747827 Phaseolus vulgaris
Phvul.005G008400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 742828-747827 Phaseolus vulgaris
Phvul.005G008400 5.0kb downstream 5.0kb downstream 8510 true Chr05: 734318-742827 Phaseolus vulgaris
Phvul.005G008400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 734318-739317 Phaseolus vulgaris
Phvul.005G008400 10.0kb upstream 10.0kb upstream 13510 true Chr05: 739318-752827 Phaseolus vulgaris
Phvul.005G008400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 742828-752827 Phaseolus vulgaris
Phvul.005G008400 10.0kb downstream 10.0kb downstream 13510 true Chr05: 729318-742827 Phaseolus vulgaris
Phvul.005G008400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 729318-739317 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299945 5265 Fabidae View MSA
124063586 5270 Rosid View MSA
123738954 5271 Pentapetalae View MSA
122785948 5272 Eudicot View MSA
122049855 5273 Angiosperm View MSA
121350266 5274 Embryophyte View MSA
123425895 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.297492 0.0 1.13639 Low  
cufflinks 1.62797 0.0 5.27202   High
cufflinks 0.643724 0.0 2.30302    
cufflinks 0.306963 0.0 1.17553 Low  
cufflinks 0.73681 0.0 2.60431    
cufflinks 0.980494 0.0 3.36758   High
cufflinks 0.118841 0.0 0.488595 Low Low
cufflinks 0.391645 0.0 1.46329 Low  
cufflinks 0.414704 0.0 1.54664 Low  
cufflinks 0.598751 0.0 2.16096    
cufflinks 0.506109 0.0 1.85622 Low  

0 Strain