Gene : Phvul.007G154000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23139//PTHR23139:SF66 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1402
Name:  ? Phvul.007G154000 Secondary Identifier:  ? PAC:37166287
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G154000 0.5kb upstream 0.5kb upstream 4489 true Chr07: 26041941-26046429 Phaseolus vulgaris
Phvul.007G154000 0.5kb upstream 0.5kb upstream 500 false Chr07: 26041941-26042440 Phaseolus vulgaris
Phvul.007G154000 0.5kb downstream 0.5kb downstream 4489 true Chr07: 26042441-26046929 Phaseolus vulgaris
Phvul.007G154000 0.5kb downstream 0.5kb downstream 500 false Chr07: 26046430-26046929 Phaseolus vulgaris
Phvul.007G154000 1.0kb upstream 1.0kb upstream 4989 true Chr07: 26041441-26046429 Phaseolus vulgaris
Phvul.007G154000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 26041441-26042440 Phaseolus vulgaris
Phvul.007G154000 1.0kb downstream 1.0kb downstream 4989 true Chr07: 26042441-26047429 Phaseolus vulgaris
Phvul.007G154000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 26046430-26047429 Phaseolus vulgaris
Phvul.007G154000 2.0kb upstream 2.0kb upstream 5989 true Chr07: 26040441-26046429 Phaseolus vulgaris
Phvul.007G154000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 26040441-26042440 Phaseolus vulgaris
Phvul.007G154000 2.0kb downstream 2.0kb downstream 5989 true Chr07: 26042441-26048429 Phaseolus vulgaris
Phvul.007G154000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 26046430-26048429 Phaseolus vulgaris
Phvul.007G154000 5.0kb upstream 5.0kb upstream 8989 true Chr07: 26037441-26046429 Phaseolus vulgaris
Phvul.007G154000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 26037441-26042440 Phaseolus vulgaris
Phvul.007G154000 5.0kb downstream 5.0kb downstream 8989 true Chr07: 26042441-26051429 Phaseolus vulgaris
Phvul.007G154000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 26046430-26051429 Phaseolus vulgaris
Phvul.007G154000 10.0kb upstream 10.0kb upstream 13989 true Chr07: 26032441-26046429 Phaseolus vulgaris
Phvul.007G154000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 26032441-26042440 Phaseolus vulgaris
Phvul.007G154000 10.0kb downstream 10.0kb downstream 13989 true Chr07: 26042441-26056429 Phaseolus vulgaris
Phvul.007G154000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 26046430-26056429 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304981 5265 Fabidae View MSA
124068050 5270 Rosid View MSA
123743802 5271 Pentapetalae View MSA
122790530 5272 Eudicot View MSA
122047712 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121310781 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.6906 0.0 64.0522   Low
cufflinks 28.7977 0.0 99.9188    
cufflinks 17.81 0.0 61.9625    
cufflinks 15.2091 0.0 54.7719   Low
cufflinks 25.5277 0.0 88.8143    
cufflinks 17.7324 0.0 63.2675    
cufflinks 23.2802 0.0 81.6071    
cufflinks 28.2433 0.0 98.1503 High  
cufflinks 23.8399 0.0 84.8819    
cufflinks 32.8579 0.0 116.828   High
cufflinks 25.0519 0.0 69.7683    

0 Strain