Gene : Phvul.007G154200 P. vulgaris v2.1
Defline:  (1 of 1) 1.1.1.1//1.1.1.284//1.2.1.1 - Alcohol dehydrogenase / Aldehyde reductase // S-(hydroxymethyl)glutathione dehydrogenase / NAD-linked formaldehyde dehydrogenase Genomic Order:  1404
Name:  ? Phvul.007G154200 Secondary Identifier:  ? PAC:37164158
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-1801 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5486 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6333 Phaseolus vulgaris pathologic  
Pvulgaris PWY66-21 Phaseolus vulgaris pathologic  
Pvulgaris PWY66-389 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6802 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G154200 0.5kb upstream 0.5kb upstream 7982 true Chr07: 26062839-26070820 Phaseolus vulgaris
Phvul.007G154200 0.5kb upstream 0.5kb upstream 500 false Chr07: 26070321-26070820 Phaseolus vulgaris
Phvul.007G154200 0.5kb downstream 0.5kb downstream 7982 true Chr07: 26062339-26070320 Phaseolus vulgaris
Phvul.007G154200 0.5kb downstream 0.5kb downstream 500 false Chr07: 26062339-26062838 Phaseolus vulgaris
Phvul.007G154200 1.0kb upstream 1.0kb upstream 8482 true Chr07: 26062839-26071320 Phaseolus vulgaris
Phvul.007G154200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 26070321-26071320 Phaseolus vulgaris
Phvul.007G154200 1.0kb downstream 1.0kb downstream 8482 true Chr07: 26061839-26070320 Phaseolus vulgaris
Phvul.007G154200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 26061839-26062838 Phaseolus vulgaris
Phvul.007G154200 2.0kb upstream 2.0kb upstream 9482 true Chr07: 26062839-26072320 Phaseolus vulgaris
Phvul.007G154200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 26070321-26072320 Phaseolus vulgaris
Phvul.007G154200 2.0kb downstream 2.0kb downstream 9482 true Chr07: 26060839-26070320 Phaseolus vulgaris
Phvul.007G154200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 26060839-26062838 Phaseolus vulgaris
Phvul.007G154200 5.0kb upstream 5.0kb upstream 12482 true Chr07: 26062839-26075320 Phaseolus vulgaris
Phvul.007G154200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 26070321-26075320 Phaseolus vulgaris
Phvul.007G154200 5.0kb downstream 5.0kb downstream 12482 true Chr07: 26057839-26070320 Phaseolus vulgaris
Phvul.007G154200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 26057839-26062838 Phaseolus vulgaris
Phvul.007G154200 10.0kb upstream 10.0kb upstream 17482 true Chr07: 26062839-26080320 Phaseolus vulgaris
Phvul.007G154200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 26070321-26080320 Phaseolus vulgaris
Phvul.007G154200 10.0kb downstream 10.0kb downstream 17482 true Chr07: 26052839-26070320 Phaseolus vulgaris
Phvul.007G154200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 26052839-26062838 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310391 5265 Fabidae View MSA
124074048 5270 Rosid View MSA
123750363 5271 Pentapetalae View MSA
122796866 5272 Eudicot View MSA
122050713 5273 Angiosperm View MSA
121350624 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.021135 0.0 0.104745 Low  
cufflinks 1.71055 0.0 5.60869   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0838883 0.0 0.363778 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.023218 0.0 0.113711 Low  
cufflinks 0.0173792 0.0 0.0879951 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain