Gene : Phvul.005G009400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23500:SF30 - SUGAR TRANSPORT PROTEIN 3 Genomic Order:  90
Name:  ? Phvul.005G009400 Secondary Identifier:  ? PAC:37152272
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G009400 0.5kb upstream 0.5kb upstream 2720 true Chr05: 820934-823653 Phaseolus vulgaris
Phvul.005G009400 0.5kb upstream 0.5kb upstream 500 false Chr05: 823154-823653 Phaseolus vulgaris
Phvul.005G009400 0.5kb downstream 0.5kb downstream 2720 true Chr05: 820434-823153 Phaseolus vulgaris
Phvul.005G009400 0.5kb downstream 0.5kb downstream 500 false Chr05: 820434-820933 Phaseolus vulgaris
Phvul.005G009400 1.0kb upstream 1.0kb upstream 3220 true Chr05: 820934-824153 Phaseolus vulgaris
Phvul.005G009400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 823154-824153 Phaseolus vulgaris
Phvul.005G009400 1.0kb downstream 1.0kb downstream 3220 true Chr05: 819934-823153 Phaseolus vulgaris
Phvul.005G009400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 819934-820933 Phaseolus vulgaris
Phvul.005G009400 2.0kb upstream 2.0kb upstream 4220 true Chr05: 820934-825153 Phaseolus vulgaris
Phvul.005G009400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 823154-825153 Phaseolus vulgaris
Phvul.005G009400 2.0kb downstream 2.0kb downstream 4220 true Chr05: 818934-823153 Phaseolus vulgaris
Phvul.005G009400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 818934-820933 Phaseolus vulgaris
Phvul.005G009400 5.0kb upstream 5.0kb upstream 7220 true Chr05: 820934-828153 Phaseolus vulgaris
Phvul.005G009400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 823154-828153 Phaseolus vulgaris
Phvul.005G009400 5.0kb downstream 5.0kb downstream 7220 true Chr05: 815934-823153 Phaseolus vulgaris
Phvul.005G009400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 815934-820933 Phaseolus vulgaris
Phvul.005G009400 10.0kb upstream 10.0kb upstream 12220 true Chr05: 820934-833153 Phaseolus vulgaris
Phvul.005G009400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 823154-833153 Phaseolus vulgaris
Phvul.005G009400 10.0kb downstream 10.0kb downstream 12220 true Chr05: 810934-823153 Phaseolus vulgaris
Phvul.005G009400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 810934-820933 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314183 5265 Fabidae View MSA
124065824 5270 Rosid View MSA
123742315 5271 Pentapetalae View MSA
122787331 5272 Eudicot View MSA
122051255 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121350723 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.96661 0.0 16.7391    
cufflinks 12.7456 0.0 33.6264    
cufflinks 25.2342 0.0 65.2279    
cufflinks 15.7076 0.0 41.1638    
cufflinks 19.6271 0.0 50.9226    
cufflinks 19.327 0.0 50.0887    
cufflinks 0.40091 0.0 1.49825 Low Low
cufflinks 0.239952 0.0 0.930398 Low Low
cufflinks 0.178398 0.0 0.712502 Low Low
cufflinks 3.44798 0.0 10.2672    
cufflinks 23.3731 0.0 60.4443    

0 Strain