Gene : Phvul.007G154400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33271:SF3 - CUPIN DOMAIN-CONTAINING PROTEIN Genomic Order:  1406
Name:  ? Phvul.007G154400 Secondary Identifier:  ? PAC:37165199
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G154400 0.5kb upstream 0.5kb upstream 1438 true Chr07: 26094577-26096014 Phaseolus vulgaris
Phvul.007G154400 0.5kb upstream 0.5kb upstream 500 false Chr07: 26094577-26095076 Phaseolus vulgaris
Phvul.007G154400 0.5kb downstream 0.5kb downstream 1438 true Chr07: 26095077-26096514 Phaseolus vulgaris
Phvul.007G154400 0.5kb downstream 0.5kb downstream 500 false Chr07: 26096015-26096514 Phaseolus vulgaris
Phvul.007G154400 1.0kb upstream 1.0kb upstream 1938 true Chr07: 26094077-26096014 Phaseolus vulgaris
Phvul.007G154400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 26094077-26095076 Phaseolus vulgaris
Phvul.007G154400 1.0kb downstream 1.0kb downstream 1938 true Chr07: 26095077-26097014 Phaseolus vulgaris
Phvul.007G154400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 26096015-26097014 Phaseolus vulgaris
Phvul.007G154400 2.0kb upstream 2.0kb upstream 2938 true Chr07: 26093077-26096014 Phaseolus vulgaris
Phvul.007G154400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 26093077-26095076 Phaseolus vulgaris
Phvul.007G154400 2.0kb downstream 2.0kb downstream 2938 true Chr07: 26095077-26098014 Phaseolus vulgaris
Phvul.007G154400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 26096015-26098014 Phaseolus vulgaris
Phvul.007G154400 5.0kb upstream 5.0kb upstream 5938 true Chr07: 26090077-26096014 Phaseolus vulgaris
Phvul.007G154400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 26090077-26095076 Phaseolus vulgaris
Phvul.007G154400 5.0kb downstream 5.0kb downstream 5938 true Chr07: 26095077-26101014 Phaseolus vulgaris
Phvul.007G154400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 26096015-26101014 Phaseolus vulgaris
Phvul.007G154400 10.0kb upstream 10.0kb upstream 10938 true Chr07: 26085077-26096014 Phaseolus vulgaris
Phvul.007G154400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 26085077-26095076 Phaseolus vulgaris
Phvul.007G154400 10.0kb downstream 10.0kb downstream 10938 true Chr07: 26095077-26106014 Phaseolus vulgaris
Phvul.007G154400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 26096015-26106014 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315039 5265 Fabidae View MSA
124060878 5270 Rosid View MSA
123742997 5271 Pentapetalae View MSA
122793157 5272 Eudicot View MSA
122044635 5273 Angiosperm View MSA
121350768 5274 Embryophyte View MSA
123425697 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.48443 0.0 28.7897   High
cufflinks 3.17805 0.0 10.9766    
cufflinks 2.97526 0.0 10.2979    
cufflinks 1.87381 0.0 6.83991    
cufflinks 1.07335 0.0 4.10997    
cufflinks 1.58551 0.0 5.85369    
cufflinks 0.837197 0.0 3.25909    
cufflinks 0.459874 0.0 1.87416   Low
cufflinks 0.460694 0.0 1.88241 Low Low
cufflinks 2.28242 0.0 8.19117    
cufflinks 0.898435 0.0 3.48723    

0 Strain