Gene : Phvul.005G011300 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11527//PTHR11527:SF131 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY // SUBFAMILY NOT NAMED Genomic Order:  109
Name:  ? Phvul.005G011300 Secondary Identifier:  ? PAC:37153737
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G011300 0.5kb upstream 0.5kb upstream 2584 true Chr05: 984129-986712 Phaseolus vulgaris
Phvul.005G011300 0.5kb upstream 0.5kb upstream 500 false Chr05: 986213-986712 Phaseolus vulgaris
Phvul.005G011300 0.5kb downstream 0.5kb downstream 2584 true Chr05: 983629-986212 Phaseolus vulgaris
Phvul.005G011300 0.5kb downstream 0.5kb downstream 500 false Chr05: 983629-984128 Phaseolus vulgaris
Phvul.005G011300 1.0kb upstream 1.0kb upstream 3084 true Chr05: 984129-987212 Phaseolus vulgaris
Phvul.005G011300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 986213-987212 Phaseolus vulgaris
Phvul.005G011300 1.0kb downstream 1.0kb downstream 3084 true Chr05: 983129-986212 Phaseolus vulgaris
Phvul.005G011300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 983129-984128 Phaseolus vulgaris
Phvul.005G011300 2.0kb upstream 2.0kb upstream 4084 true Chr05: 984129-988212 Phaseolus vulgaris
Phvul.005G011300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 986213-988212 Phaseolus vulgaris
Phvul.005G011300 2.0kb downstream 2.0kb downstream 4084 true Chr05: 982129-986212 Phaseolus vulgaris
Phvul.005G011300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 982129-984128 Phaseolus vulgaris
Phvul.005G011300 5.0kb upstream 5.0kb upstream 7084 true Chr05: 984129-991212 Phaseolus vulgaris
Phvul.005G011300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 986213-991212 Phaseolus vulgaris
Phvul.005G011300 5.0kb downstream 5.0kb downstream 7084 true Chr05: 979129-986212 Phaseolus vulgaris
Phvul.005G011300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 979129-984128 Phaseolus vulgaris
Phvul.005G011300 10.0kb upstream 10.0kb upstream 12084 true Chr05: 984129-996212 Phaseolus vulgaris
Phvul.005G011300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 986213-996212 Phaseolus vulgaris
Phvul.005G011300 10.0kb downstream 10.0kb downstream 12084 true Chr05: 974129-986212 Phaseolus vulgaris
Phvul.005G011300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 974129-984128 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312292 5265 Fabidae View MSA
124074314 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.836802 0.0 3.02167    
cufflinks 1.27895 0.0 4.40862    
cufflinks 3.76228 0.0 11.4231    
cufflinks 3.18749 0.0 10.0123    
cufflinks 2.19033 0.0 7.21983    
cufflinks 1.17915 0.0 4.09447    
cufflinks 3.45983 0.0 10.5701    
cufflinks 0.998834 0.0 3.49484    
cufflinks 4.53674 0.0 13.4246    
cufflinks 0.0808702 0.0 0.356212 Low Low
cufflinks 4.5273 0.0 13.614    

0 Strain