Gene : Phvul.005G012300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR33512:SF2 - F16P17.15 Genomic Order:  119
Name:  ? Phvul.005G012300 Secondary Identifier:  ? PAC:37152925
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G012300 0.5kb upstream 0.5kb upstream 1433 true Chr05: 1052426-1053858 Phaseolus vulgaris
Phvul.005G012300 0.5kb upstream 0.5kb upstream 500 false Chr05: 1053359-1053858 Phaseolus vulgaris
Phvul.005G012300 0.5kb downstream 0.5kb downstream 1433 true Chr05: 1051926-1053358 Phaseolus vulgaris
Phvul.005G012300 0.5kb downstream 0.5kb downstream 500 false Chr05: 1051926-1052425 Phaseolus vulgaris
Phvul.005G012300 1.0kb upstream 1.0kb upstream 1933 true Chr05: 1052426-1054358 Phaseolus vulgaris
Phvul.005G012300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1053359-1054358 Phaseolus vulgaris
Phvul.005G012300 1.0kb downstream 1.0kb downstream 1933 true Chr05: 1051426-1053358 Phaseolus vulgaris
Phvul.005G012300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1051426-1052425 Phaseolus vulgaris
Phvul.005G012300 2.0kb upstream 2.0kb upstream 2933 true Chr05: 1052426-1055358 Phaseolus vulgaris
Phvul.005G012300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1053359-1055358 Phaseolus vulgaris
Phvul.005G012300 2.0kb downstream 2.0kb downstream 2933 true Chr05: 1050426-1053358 Phaseolus vulgaris
Phvul.005G012300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1050426-1052425 Phaseolus vulgaris
Phvul.005G012300 5.0kb upstream 5.0kb upstream 5933 true Chr05: 1052426-1058358 Phaseolus vulgaris
Phvul.005G012300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1053359-1058358 Phaseolus vulgaris
Phvul.005G012300 5.0kb downstream 5.0kb downstream 5933 true Chr05: 1047426-1053358 Phaseolus vulgaris
Phvul.005G012300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1047426-1052425 Phaseolus vulgaris
Phvul.005G012300 10.0kb upstream 10.0kb upstream 10933 true Chr05: 1052426-1063358 Phaseolus vulgaris
Phvul.005G012300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1053359-1063358 Phaseolus vulgaris
Phvul.005G012300 10.0kb downstream 10.0kb downstream 10933 true Chr05: 1042426-1053358 Phaseolus vulgaris
Phvul.005G012300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1042426-1052425 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302736 5265 Fabidae View MSA
124063099 5270 Rosid View MSA
123739711 5271 Pentapetalae View MSA
122787000 5272 Eudicot View MSA
122049510 5273 Angiosperm View MSA
121311447 5274 Embryophyte View MSA
123348742 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.943158 0.0 3.49047    
cufflinks 3.547 0.0 11.4088    
cufflinks 2.74083 0.0 9.02674    
cufflinks 5.63114 0.0 17.3224   High
cufflinks 3.30727 0.0 10.7999    
cufflinks 2.66597 0.0 8.84475    
cufflinks 1.26272 0.0 4.54075    
cufflinks 0.635287 0.0 2.42263    
cufflinks 2.51901 0.0 8.40586    
cufflinks 0.0999038 0.0 0.447992 Low Low
cufflinks 3.28946 0.0 10.7116    

0 Strain