Gene : Phvul.007G155500 P. vulgaris v2.1
Defline:  (1 of 2) K02693 - photosystem I subunit IV (psaE) Genomic Order:  1417
Name:  ? Phvul.007G155500 Secondary Identifier:  ? PAC:37167539
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G155500 0.5kb upstream 0.5kb upstream 2102 true Chr07: 26272152-26274253 Phaseolus vulgaris
Phvul.007G155500 0.5kb upstream 0.5kb upstream 500 false Chr07: 26273754-26274253 Phaseolus vulgaris
Phvul.007G155500 0.5kb downstream 0.5kb downstream 2102 true Chr07: 26271652-26273753 Phaseolus vulgaris
Phvul.007G155500 0.5kb downstream 0.5kb downstream 500 false Chr07: 26271652-26272151 Phaseolus vulgaris
Phvul.007G155500 1.0kb upstream 1.0kb upstream 2602 true Chr07: 26272152-26274753 Phaseolus vulgaris
Phvul.007G155500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 26273754-26274753 Phaseolus vulgaris
Phvul.007G155500 1.0kb downstream 1.0kb downstream 2602 true Chr07: 26271152-26273753 Phaseolus vulgaris
Phvul.007G155500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 26271152-26272151 Phaseolus vulgaris
Phvul.007G155500 2.0kb upstream 2.0kb upstream 3602 true Chr07: 26272152-26275753 Phaseolus vulgaris
Phvul.007G155500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 26273754-26275753 Phaseolus vulgaris
Phvul.007G155500 2.0kb downstream 2.0kb downstream 3602 true Chr07: 26270152-26273753 Phaseolus vulgaris
Phvul.007G155500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 26270152-26272151 Phaseolus vulgaris
Phvul.007G155500 5.0kb upstream 5.0kb upstream 6602 true Chr07: 26272152-26278753 Phaseolus vulgaris
Phvul.007G155500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 26273754-26278753 Phaseolus vulgaris
Phvul.007G155500 5.0kb downstream 5.0kb downstream 6602 true Chr07: 26267152-26273753 Phaseolus vulgaris
Phvul.007G155500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 26267152-26272151 Phaseolus vulgaris
Phvul.007G155500 10.0kb upstream 10.0kb upstream 11602 true Chr07: 26272152-26283753 Phaseolus vulgaris
Phvul.007G155500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 26273754-26283753 Phaseolus vulgaris
Phvul.007G155500 10.0kb downstream 10.0kb downstream 11602 true Chr07: 26262152-26273753 Phaseolus vulgaris
Phvul.007G155500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 26262152-26272151 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304273 5265 Fabidae View MSA
124068589 5270 Rosid View MSA
123747276 5271 Pentapetalae View MSA
122791001 5272 Eudicot View MSA
122047877 5273 Angiosperm View MSA
121348572 5274 Embryophyte View MSA
123426677 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 145.896 0.0 477.078 High  
cufflinks 250.173 0.0 904.499 High  
cufflinks 2355.37 0.0 19419.0 High High
cufflinks 132.132 0.0 433.294 High  
cufflinks 247.745 0.0 890.965 High  
cufflinks 689.165 0.0 2886.18 High  
cufflinks 0.489397 0.0 1.97077 Low Low
cufflinks 0.230894 0.0 1.00675 Low Low
cufflinks 1.30635 0.0 6.11029   Low
cufflinks 94.9983 0.0 300.731 High  
cufflinks 158.985 0.0 525.055 High  

0 Strain