Gene : Phvul.005G014300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10252//PTHR10252:SF40 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // SUBFAMILY NOT NAMED Genomic Order:  149
Name:  ? Phvul.005G014300 Secondary Identifier:  ? PAC:37153872
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G014300 0.5kb upstream 0.5kb upstream 5370 true Chr05: 1330234-1335603 Phaseolus vulgaris
Phvul.005G014300 0.5kb upstream 0.5kb upstream 500 false Chr05: 1330234-1330733 Phaseolus vulgaris
Phvul.005G014300 0.5kb downstream 0.5kb downstream 5370 true Chr05: 1330734-1336103 Phaseolus vulgaris
Phvul.005G014300 0.5kb downstream 0.5kb downstream 500 false Chr05: 1335604-1336103 Phaseolus vulgaris
Phvul.005G014300 1.0kb upstream 1.0kb upstream 5870 true Chr05: 1329734-1335603 Phaseolus vulgaris
Phvul.005G014300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1329734-1330733 Phaseolus vulgaris
Phvul.005G014300 1.0kb downstream 1.0kb downstream 5870 true Chr05: 1330734-1336603 Phaseolus vulgaris
Phvul.005G014300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1335604-1336603 Phaseolus vulgaris
Phvul.005G014300 2.0kb upstream 2.0kb upstream 6870 true Chr05: 1328734-1335603 Phaseolus vulgaris
Phvul.005G014300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1328734-1330733 Phaseolus vulgaris
Phvul.005G014300 2.0kb downstream 2.0kb downstream 6870 true Chr05: 1330734-1337603 Phaseolus vulgaris
Phvul.005G014300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1335604-1337603 Phaseolus vulgaris
Phvul.005G014300 5.0kb upstream 5.0kb upstream 9870 true Chr05: 1325734-1335603 Phaseolus vulgaris
Phvul.005G014300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1325734-1330733 Phaseolus vulgaris
Phvul.005G014300 5.0kb downstream 5.0kb downstream 9870 true Chr05: 1330734-1340603 Phaseolus vulgaris
Phvul.005G014300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1335604-1340603 Phaseolus vulgaris
Phvul.005G014300 10.0kb upstream 10.0kb upstream 14870 true Chr05: 1320734-1335603 Phaseolus vulgaris
Phvul.005G014300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1320734-1330733 Phaseolus vulgaris
Phvul.005G014300 10.0kb downstream 10.0kb downstream 14870 true Chr05: 1330734-1345603 Phaseolus vulgaris
Phvul.005G014300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1335604-1345603 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309450 5265 Fabidae View MSA
124069286 5270 Rosid View MSA
123742462 5271 Pentapetalae View MSA
122792661 5272 Eudicot View MSA
122049084 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121345521 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.57967 0.0 16.1656    
cufflinks 5.2836 0.0 15.4174    
cufflinks 3.85746 0.0 11.654   Low
cufflinks 4.93899 0.0 14.614    
cufflinks 3.61314 0.0 11.0498   Low
cufflinks 5.80063 0.0 16.7629   High
cufflinks 6.45525 0.0 18.3864   High
cufflinks 4.58155 0.0 13.5385    
cufflinks 4.94926 0.0 14.5299    
cufflinks 4.88912 0.0 14.4105    
cufflinks 4.38325 0.0 13.0879    

0 Strain